RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 UBXN6Q9BZV1 441 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 LRRC4Q9HBW1 653 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 CSNK1G1Q9HCP0 422 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 MRPL47Q9HD33 250 aaKnown RBP11.66□□□□□ -0.54
SF3B3-205ENST00000564899 ABCB6Q9NP58 842 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 OSGEPQ9NPF4 335 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.66□□□□□ -0.54
SF3B3-205ENST00000564899 TMEM30AQ9NV96 361 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 PARVAQ9NVD7 372 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 UVRAGQ9P2Y5 699 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 LZTS1Q9Y250 596 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 CAPN6Q9Y6Q1 641 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 ZFHX4Q86UP3 3567 aa11.66□□□□□ -0.54
SF3B3-205ENST00000564899 EP300Q09472 2414 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-205ENST00000564899 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-205ENST00000564899 TCRBV5S1A1TA0A578 114 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 WDR27A2RRH5 827 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 F8VP50 259 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 KIF2AO00139 706 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-205ENST00000564899 TRIM66O15016 1216 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 MTA2O94776 668 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 RPL34P49207 117 aaKnown RBP11.65□□□□□ -0.54
SF3B3-205ENST00000564899 HADHBP55084 474 aaKnown RBP11.65□□□□□ -0.54
SF3B3-205ENST00000564899 ETF1P62495 437 aaKnown RBP11.65□□□□□ -0.54
SF3B3-205ENST00000564899 UBE3AQ05086 875 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 SIGLEC14Q08ET2 396 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 ADIGQ0VDE8 80 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 MAMLD1Q13495 774 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 MGAT5BQ3V5L5 792 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 FAM102AQ5T9C2 384 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-205ENST00000564899 DCUN1D2Q6PH85 259 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 VSTM1Q6UX27 236 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 FAM183BPQ6ZVS7 135 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 SCN4BQ8IWT1 228 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 SIX6OS1Q8N1H7 587 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 TRIM58Q8NG06 486 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 TPCN2Q8NHX9 752 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 POF1BQ8WVV4 589 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 ATOH1Q92858 354 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-205ENST00000564899 MCRS1Q96EZ8 462 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 CALR3Q96L12 384 aaKnown RBP11.65□□□□□ -0.54
SF3B3-205ENST00000564899 SEPT5Q99719 369 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-205ENST00000564899 TCF25Q9BQ70 676 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 SELENOOQ9BVL4 669 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 APOL5Q9BWW9 433 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 RXFP1Q9HBX9 757 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 PNPLA8Q9NP80 782 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 ENTPD7Q9NQZ7 604 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 FNIP2Q9P278 1114 aa11.65□□□□□ -0.54
SF3B3-205ENST00000564899 GRID2IPA4D2P6 1211 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 HHLA1C9JL84 531 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 TEX28O15482 410 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 PAPSS1O43252 624 aaPredicted RBP11.64□□□□□ -0.55
SF3B3-205ENST00000564899 LILRB3O75022 631 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 PALMO75781 387 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 GABBR2O75899 941 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 GJB6O95452 261 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 VNN2O95498 520 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 CXCL14O95715 111 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 TUBB4AP04350 444 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 HAPLN1P10915 354 aaPredicted RBP11.64□□□□□ -0.55
SF3B3-205ENST00000564899 TNNT1P13805 278 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 TKTL1P51854 596 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 ADCY1Q08828 1119 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 RAB33AQ14088 237 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 SMC1AQ14683 1233 aaKnown RBP11.64□□□□□ -0.55
SF3B3-205ENST00000564899 PLPP4Q5VZY2 271 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 TPGS2Q68CL5 300 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 OLFML1Q6UWY5 402 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 GPRIN1Q7Z2K8 1008 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 ZDHHC17Q8IUH5 632 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 SLC35F6Q8N357 371 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 TTC9BQ8N6N2 239 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 FEZF2Q8TBJ5 459 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 SUSD6Q92537 303 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 C8orf48Q96LL4 319 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 MCEEQ96PE7 176 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 PHF7Q9BWX1 381 aaPredicted RBP11.64□□□□□ -0.55
SF3B3-205ENST00000564899 CRISPLD1Q9H336 500 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 METTL5Q9NRN9 209 aaKnown RBP11.64□□□□□ -0.55
SF3B3-205ENST00000564899 AFF4Q9UHB7 1163 aaKnown RBP11.64□□□□□ -0.55
SF3B3-205ENST00000564899 ANAPC7Q9UJX3 599 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 EPG5Q9HCE0 2579 aa11.64□□□□□ -0.55
SF3B3-205ENST00000564899 SIGLEC16A6NMB1 481 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 TMEM110-MUSTN1A8MSY1 372 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 BUB1BO60566 1050 aaPredicted RBP11.63□□□□□ -0.55
SF3B3-205ENST00000564899 FBXO21O94952 628 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 CNPP09543 421 aaKnown RBP11.63□□□□□ -0.55
SF3B3-205ENST00000564899 KRT3P12035 628 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 SCNN1AP37088 669 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 GPR15P49685 360 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 SLC5A3P53794 718 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 ERVFC1P60507 584 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 SLC6A3Q01959 620 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 DUSP4Q13115 394 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 DDR2Q16832 855 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 RAB41Q5JT25 222 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 PPP1R15BQ5SWA1 713 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 C11orf63Q6NUN7 778 aa11.63□□□□□ -0.55
SF3B3-205ENST00000564899 SYT10Q6XYQ8 523 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms