RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.33	□□□□□ -0.76
SIN3A-205	ENST00000564778	DPP7	Q9UHL4	492 aa		10.33	□□□□□ -0.76
SIN3A-205	ENST00000564778	ANAPC7	Q9UJX3	599 aa		10.33	□□□□□ -0.76
SIN3A-205	ENST00000564778	GUCA1B	Q9UMX6	200 aa		10.33	□□□□□ -0.76
SIN3A-205	ENST00000564778	ASB3	Q9Y575	518 aa		10.33	□□□□□ -0.76
SIN3A-205	ENST00000564778	CAPN6	Q9Y6Q1	641 aa		10.33	□□□□□ -0.76
SIN3A-205	ENST00000564778		A0A0C4DFX4	3053 aa		10.33	□□□□□ -0.76
SIN3A-205	ENST00000564778	EYS	Q5T1H1	3165 aa		10.33	□□□□□ -0.76
SIN3A-205	ENST00000564778	PRUNE2	Q8WUY3	3088 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	SLC38A8	A6NNN8	435 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	YJEFN3	A6XGL0	299 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778		E7ENQ6	273 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	PIK3R2	O00459	728 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	BUB1	O43683	1085 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	KIF5C	O60282	957 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	ZMYND10	O75800	440 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	MOCS3	O95396	460 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	GJB6	O95452	261 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	USP17L7	P0C7H9	530 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	CSH1	P0DML2	217 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	CSH2	P0DML3	217 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	HMGA1	P17096	107 aa	Known RBP	10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	YWHAQ	P27348	245 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	RFC1	P35251	1148 aa	Predicted RBP	10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	FLT3	P36888	993 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	PTPN9	P43378	593 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	ALDH1A3	P47895	512 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	PSEN1	P49768	467 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	OGDH	Q02218	1023 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	ZNF252P-AS1	Q0IIN9	211 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	TWF1	Q12792	350 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	KCNC3	Q14003	757 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	VEPH1	Q14D04	833 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	TAF5	Q15542	800 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	TRNP1	Q6NT89	227 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	DCUN1D2	Q6PH85	259 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	SLFN11	Q7Z7L1	901 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	PHLDB2	Q86SQ0	1253 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	ITIH5	Q86UX2	942 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	MON1A	Q86VX9	555 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	TRIM58	Q8NG06	486 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	JOSD2	Q8TAC2	188 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	UBE2Q2	Q8WVN8	375 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	PPP2R3C	Q969Q6	453 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	PSMG2	Q969U7	264 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	ALS2CR12	Q96Q35	445 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	TRIM7	Q9C029	511 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	NSUN3	Q9H649	340 aa	Known RBP	10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	MAN1C1	Q9NR34	630 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	PAXBP1	Q9Y5B6	917 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	HCFC2	Q9Y5Z7	792 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	CUL9	Q8IWT3	2517 aa		10.32	□□□□□ -0.76
SIN3A-205	ENST00000564778	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	MYO1F	O00160	1098 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	BUB1B	O60566	1050 aa	Predicted RBP	10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	PROSC	O94903	275 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	CSPG5	O95196	566 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	LTF	P02788	710 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	TUBB4A	P04350	444 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	FYN	P06241	537 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	HNRNPA1	P09651	372 aa	Known RBP eCLIP	10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	EPCAM	P16422	314 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	POU3F3	P20264	500 aa	Predicted RBP	10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	GPD1	P21695	349 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	IGFBP4	P22692	258 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	MATK	P42679	507 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	NOP2	P46087	812 aa	Known RBP	10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	ZNF143	P52747	638 aa	Predicted RBP	10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	EPHB3	P54753	998 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	YWHAZ	P63104	245 aa	Known RBP	10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	MTMR3	Q13615	1198 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	SNX30	Q5VWJ9	437 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	ELMSAN1	Q6PJG2	1045 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	HFE2	Q6ZVN8	426 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	BNIPL	Q7Z465	357 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	SYCE1	Q8N0S2	351 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	ARHGAP18	Q8N392	663 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	STKLD1	Q8NE28	680 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	PDZD8	Q8NEN9	1154 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	GPR152	Q8TDT2	470 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	FBXO32	Q969P5	355 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	NT5C3B	Q969T7	300 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	FAM149B1	Q96BN6	582 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	SLITRK1	Q96PX8	696 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	CNPY3	Q9BT09	278 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	DDX23	Q9BUQ8	820 aa	Known RBP	10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	IRX2	Q9BZI1	471 aa	Predicted RBP	10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	TLE6	Q9H808	572 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	POPDC2	Q9HBU9	364 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	ZDHHC7	Q9NXF8	308 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	RRN3	Q9NYV6	651 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	CLIC5	Q9NZA1	410 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	UXT	Q9UBK9	157 aa	Predicted RBP	10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	IP6K2	Q9UHH9	426 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	OBSL1	O75147	1896 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	UNC80	Q8N2C7	3258 aa		10.31	□□□□□ -0.76
SIN3A-205	ENST00000564778	KIF2A	O00139	706 aa	Predicted RBP	10.3	□□□□□ -0.76
SIN3A-205	ENST00000564778	RFXAP	O00287	272 aa		10.3	□□□□□ -0.76
SIN3A-205	ENST00000564778	TADA3	O75528	432 aa		10.3	□□□□□ -0.76
SIN3A-205	ENST00000564778	PALM	O75781	387 aa		10.3	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms