RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 USP13Q92995 863 aaPredicted RBP16.79■□□□□ 0.28
RAB40C-208ENST00000564703 PLA2G2FQ9BZM2 168 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 MIS12Q9H081 205 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 RNF38Q9H0F5 515 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 SYNCQ9H7C4 482 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 CYLDQ9NQC7 956 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 CLIC5Q9NZA1 410 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 FBXL21Q9UKT6 434 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 C5orf42Q9H799 3197 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 UNC80Q8N2C7 3258 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 PIK3R2O00459 728 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 SART1O43290 800 aaKnown RBP16.78■□□□□ 0.28
RAB40C-208ENST00000564703 COCHO43405 550 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 TLR5O60602 858 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 OAS1P00973 400 aaKnown RBP16.78■□□□□ 0.28
RAB40C-208ENST00000564703 CFHP08603 1231 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 FCARP24071 287 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 GDI1P31150 447 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 SLC7A9P82251 487 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 GOLGA8FQ08AF8 430 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 GOLGA8DPQ0D2H9 430 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 GRM2Q14416 872 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 ARHGAP29Q52LW3 1261 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 FIGNQ5HY92 759 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 C10orf120Q5SQS8 335 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 SFMBT2Q5VUG0 894 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 VITQ6UXI7 678 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 NOP9Q86U38 636 aaKnown RBP16.78■□□□□ 0.28
RAB40C-208ENST00000564703 DDX42Q86XP3 938 aaKnown RBP eCLIP16.78■□□□□ 0.28
RAB40C-208ENST00000564703 SCUBE3Q8IX30 993 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 SCML4Q8N228 414 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 MSANTD4Q8NCY6 345 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 RNF139Q8WU17 664 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 CPLX3Q8WVH0 158 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 IRGQQ8WZA9 623 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 PPP1R13BQ96KQ4 1090 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 SLC22A12Q96S37 553 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 SLC4A5Q9BY07 1137 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 NUCKS1Q9H1E3 243 aaKnown RBP16.78■□□□□ 0.28
RAB40C-208ENST00000564703 CCSER2Q9H7U1 834 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 ARHGAP26Q9UNA1 814 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 DUSP12Q9UNI6 340 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 ANAPC1Q9H1A4 1944 aa16.78■□□□□ 0.28
RAB40C-208ENST00000564703 PRAMEF12O95522 483 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 TPM1P09493 284 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 CDR2Q01850 454 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 BSPRYQ5W0U4 402 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 SCD5Q86SK9 330 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 TMEM110Q86TL2 294 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 ZNF276Q8N554 614 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 CSGALNACT1Q8TDX6 532 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 EPS8L1Q8TE68 723 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 SH3RF2Q8TEC5 729 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 IPO4Q8TEX9 1081 aaKnown RBP16.77■□□□□ 0.28
RAB40C-208ENST00000564703 TRIM62Q9BVG3 475 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 TRIM5Q9C035 493 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 NMUR1Q9HB89 426 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 ABCC13Q9NSE7 274 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 OLA1Q9NTK5 396 aaKnown RBP16.77■□□□□ 0.28
RAB40C-208ENST00000564703 SMPD4Q9NXE4 827 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 WNT16Q9UBV4 365 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 DNMT3LQ9UJW3 386 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 STRIP2Q9ULQ0 834 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 CPQQ9Y646 472 aa16.77■□□□□ 0.28
RAB40C-208ENST00000564703 TTC28Q96AY4 2481 aa16.77■□□□□ 0.27
RAB40C-208ENST00000564703 CHADO15335 359 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 NARSO43776 548 aaKnown RBP16.76■□□□□ 0.27
RAB40C-208ENST00000564703 LSM8O95777 96 aaKnown RBP16.76■□□□□ 0.27
RAB40C-208ENST00000564703 MMEP08473 750 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 TNFAIP3P21580 790 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 DAOAP59103 153 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 SIGLEC14Q08ET2 396 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 PDCLQ13371 301 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 ASIC2Q16515 512 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 KLHDC10Q6PID8 442 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 TRIM72Q6ZMU5 477 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 ERICH1Q86X53 443 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 WDTC1Q8N5D0 677 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 C1orf131Q8NDD1 294 aaKnown RBP16.76■□□□□ 0.27
RAB40C-208ENST00000564703 DDX1Q92499 740 aaKnown RBP16.76■□□□□ 0.27
RAB40C-208ENST00000564703 NDRG1Q92597 394 aaKnown RBP16.76■□□□□ 0.27
RAB40C-208ENST00000564703 KHSRPQ92945 711 aaKnown RBP eCLIP16.76■□□□□ 0.27
RAB40C-208ENST00000564703 FAM149B1Q96BN6 582 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 RBSNQ9H1K0 784 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 EPHX3Q9H6B9 360 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 SLC2A4RGQ9NR83 387 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 GKN1Q9NS71 199 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 SEPT11Q9NVA2 429 aaKnown RBP16.76■□□□□ 0.27
RAB40C-208ENST00000564703 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.76■□□□□ 0.27
RAB40C-208ENST00000564703 OSER1Q9NX31 292 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 CCL26Q9Y258 94 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 LUC7L2Q9Y383 392 aaKnown RBP16.76■□□□□ 0.27
RAB40C-208ENST00000564703 SH3BP1Q9Y3L3 701 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 OBSL1O75147 1896 aa16.76■□□□□ 0.27
RAB40C-208ENST00000564703 A0A1W2PQJ5 194 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 LRRC53A6NM62 1247 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 YJEFN3A6XGL0 299 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 E5RJQ4 531 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 E7ENQ6 273 aa16.75■□□□□ 0.27
RAB40C-208ENST00000564703 LEFTY2O00292 366 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms