RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 MAP3K7CLP57077 242 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 GAD2Q05329 585 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 PPP3CAQ08209 521 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 GOLGA8FQ08AF8 430 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 GOLGA8DPQ0D2H9 430 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 ELF2Q15723 593 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 COBLL1Q53SF7 1204 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 BTBD8Q5XKL5 378 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 KRT39Q6A163 491 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 KLHDC10Q6PID8 442 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 RHBDF2Q6PJF5 856 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 ZNF276Q8N554 614 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 ZMIZ2Q8NF64 920 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 TSTD1Q8NFU3 115 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 DDX1Q92499 740 aaKnown RBP15.86■□□□□ 0.13
SPG7-210ENST00000564409 CYFIP2Q96F07 1278 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 ZFRQ96KR1 1074 aaKnown RBP15.86■□□□□ 0.13
SPG7-210ENST00000564409 HHIPQ96QV1 700 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 GOLPH3LQ9H4A5 285 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 GMIPQ9P107 970 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 MMP17Q9ULZ9 603 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 MAPK8IP1Q9UQF2 711 aa15.86■□□□□ 0.13
SPG7-210ENST00000564409 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.86■□□□□ 0.13
SPG7-210ENST00000564409 GOLGA6L4A6NEF3 574 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 CETN3O15182 167 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 HOXC11O43248 304 aaPredicted RBP15.85■□□□□ 0.13
SPG7-210ENST00000564409 TLR5O60602 858 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 CILPO75339 1184 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 KAT7O95251 611 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 EPB41P11171 864 aaKnown RBP15.85■□□□□ 0.13
SPG7-210ENST00000564409 PSEN1P49768 467 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 LIMK1P53667 647 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 BECN1Q14457 450 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 USP39Q53GS9 565 aaKnown RBP15.85■□□□□ 0.13
SPG7-210ENST00000564409 C2orf27AQ580R0 203 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 SPOPLQ6IQ16 392 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 TADA2BQ86TJ2 420 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 KBTBD6Q86V97 674 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 C12orf29Q8N999 325 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 TAS1R2Q8TE23 839 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 CHAMP1Q96JM3 812 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 GSDMAQ96QA5 445 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 CCSER2Q9H7U1 834 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 CYLDQ9NQC7 956 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 FAM49BQ9NUQ9 324 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 HMGXB4Q9UGU5 601 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 HOOK1Q9UJC3 728 aaKnown RBP15.85■□□□□ 0.13
SPG7-210ENST00000564409 NUP205Q92621 2012 aa15.85■□□□□ 0.13
SPG7-210ENST00000564409 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.84■□□□□ 0.13
SPG7-210ENST00000564409 MED19A0JLT2 244 aaPredicted RBP15.84■□□□□ 0.13
SPG7-210ENST00000564409 BEST1O76090 585 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 ALDH1A2O94788 518 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 TRIM49P0CI25 452 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 TRIM49CP0CI26 452 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 ATP5C1P36542 298 aaKnown RBP15.84■□□□□ 0.13
SPG7-210ENST00000564409 PLK5Q496M5 336 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 EOGTQ5NDL2 527 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 LY6G5CQ5SRR4 150 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 CLEC20AQ6ZU45 233 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 HTR3DQ70Z44 454 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 TRMT11Q7Z4G4 463 aaKnown RBP15.84■□□□□ 0.13
SPG7-210ENST00000564409 RASSF3Q86WH2 238 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 C12orf50Q8NA57 414 aaPredicted RBP15.84■□□□□ 0.13
SPG7-210ENST00000564409 FBXL13Q8NEE6 735 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 ELMO3Q96BJ8 720 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 CNOT6LQ96LI5 555 aaKnown RBP15.84■□□□□ 0.13
SPG7-210ENST00000564409 CDK5RAP1Q96SZ6 601 aaKnown RBP15.84■□□□□ 0.13
SPG7-210ENST00000564409 ARRDC1-AS1Q9H2J1 176 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 APOBEC3GQ9HC16 384 aaKnown RBP15.84■□□□□ 0.13
SPG7-210ENST00000564409 LSM7Q9UK45 103 aaKnown RBP15.84■□□□□ 0.13
SPG7-210ENST00000564409 GTF3C3Q9Y5Q9 886 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 THADAQ6YHU6 1953 aa15.84■□□□□ 0.13
SPG7-210ENST00000564409 HHLA1C9JL84 531 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 SMC2O95347 1197 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 ADORA2BP29275 332 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 HOXC13P31276 330 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 MXI1P50539 228 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 NUCB2P80303 420 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 ORC1Q13415 861 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 CRY1Q16526 586 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 PLA2G2CQ5R387 149 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 ZNF658Q5TYW1 1059 aaPredicted RBP15.83■□□□□ 0.12
SPG7-210ENST00000564409 FMR1NBQ8N0W7 255 aaPredicted RBP15.83■□□□□ 0.12
SPG7-210ENST00000564409 TSG101Q99816 390 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 DUSP16Q9BY84 665 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 UBXN6Q9BZV1 441 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 DUSP15Q9H1R2 295 aaPredicted RBP15.83■□□□□ 0.12
SPG7-210ENST00000564409 ARHGEF4Q9NR80 690 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 SPHK2Q9NRA0 654 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 VPS45Q9NRW7 570 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 WDR35Q9P2L0 1181 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 DEC1Q9P2X7 70 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 ABCA7Q8IZY2 2146 aa15.83■□□□□ 0.12
SPG7-210ENST00000564409 PLXND1Q9Y4D7 1925 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 SLC16A3O15427 465 aaKnown RBP15.82■□□□□ 0.12
SPG7-210ENST00000564409 ACO1P21399 889 aaKnown RBP15.82■□□□□ 0.12
SPG7-210ENST00000564409 KIR2DL1P43626 348 aaPredicted RBP15.82■□□□□ 0.12
SPG7-210ENST00000564409 PLA2G4AP47712 749 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 SLC6A11P48066 632 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 KIF11P52732 1056 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms