RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 RNPEPQ9H4A4 650 aa11.53□□□□□ -0.56
TCF4-222ENST00000564228 TMEM165Q9HC07 324 aa11.53□□□□□ -0.56
TCF4-222ENST00000564228 OLFML3Q9NRN5 406 aa11.53□□□□□ -0.56
TCF4-222ENST00000564228 DNAJC17Q9NVM6 304 aaKnown RBP11.53□□□□□ -0.56
TCF4-222ENST00000564228 PLK2Q9NYY3 685 aa11.53□□□□□ -0.56
TCF4-222ENST00000564228 PSMC3IPQ9P2W1 217 aaPredicted RBP11.53□□□□□ -0.56
TCF4-222ENST00000564228 SEL1LQ9UBV2 794 aa11.53□□□□□ -0.56
TCF4-222ENST00000564228 UBE4BO95155 1302 aa11.53□□□□□ -0.56
TCF4-222ENST00000564228 K7ENM7 598 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 NDC80O14777 642 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 ADCY3O60266 1144 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 ATP5BP06576 529 aaKnown RBP11.52□□□□□ -0.56
TCF4-222ENST00000564228 ZFXP17010 805 aaPredicted RBP11.52□□□□□ -0.56
TCF4-222ENST00000564228 SLC1A1P43005 524 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 MAGEA10P43363 369 aaPredicted RBP11.52□□□□□ -0.56
TCF4-222ENST00000564228 CD97P48960 835 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 ADARP55265 1226 aaKnown RBP11.52□□□□□ -0.56
TCF4-222ENST00000564228 PEX3P56589 373 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 GEMIN4P57678 1058 aaKnown RBP11.52□□□□□ -0.56
TCF4-222ENST00000564228 BEX3Q00994 111 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 CACNB2Q08289 660 aaPredicted RBP11.52□□□□□ -0.56
TCF4-222ENST00000564228 DCTN2Q13561 401 aaKnown RBP11.52□□□□□ -0.56
TCF4-222ENST00000564228 TBCCQ15814 346 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 CCDC142Q17RM4 750 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 CLEC16AQ2KHT3 1053 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 IZUMO3Q5VZ72 239 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 CHSY1Q86X52 802 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 ZNF276Q8N554 614 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 MCPH1Q8NEM0 835 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 FAM172AQ8WUF8 416 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 ALKBH8Q96BT7 664 aaKnown RBP11.52□□□□□ -0.56
TCF4-222ENST00000564228 PRICKLE1Q96MT3 831 aaPredicted RBP11.52□□□□□ -0.56
TCF4-222ENST00000564228 BTBD9Q96Q07 612 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 RBM15Q96T37 977 aaKnown RBP eCLIP11.52□□□□□ -0.56
TCF4-222ENST00000564228 C16orf70Q9BSU1 422 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 TMEM120AQ9BXJ8 343 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 EBF3Q9H4W6 596 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 XPNPEP1Q9NQW7 623 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 ARHGEF4Q9NR80 690 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 CHST7Q9NS84 486 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 DCTN4Q9UJW0 460 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 GTF3C4Q9UKN8 822 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 PLA2G4CQ9UP65 541 aa11.52□□□□□ -0.56
TCF4-222ENST00000564228 A0A0G2JND7 137 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 H3BRB1 525 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 PLS3P13797 630 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 PRKAR2AP13861 404 aaKnown RBP11.52□□□□□ -0.57
TCF4-222ENST00000564228 RRM1P23921 792 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 RPL5P46777 297 aaKnown RBP11.52□□□□□ -0.57
TCF4-222ENST00000564228 CHN2P52757 468 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 C1QTNF8P60827 252 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 IGBP1P78318 339 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 IRX4P78413 519 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 MYL7Q01449 175 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 TARBP2Q15633 366 aaKnown RBP11.52□□□□□ -0.57
TCF4-222ENST00000564228 PRUNE1Q86TP1 453 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 SATL1Q86VE3 508 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 RASSF3Q86WH2 238 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 KSR1Q8IVT5 923 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 C4orf33Q8N1A6 199 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 SLC20A1Q8WUM9 679 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 TRAPPC12Q8WVT3 735 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 TMEM143Q96AN5 459 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 OXNAD1Q96HP4 312 aaPredicted RBP11.52□□□□□ -0.57
TCF4-222ENST00000564228 ZFRQ96KR1 1074 aaKnown RBP11.52□□□□□ -0.57
TCF4-222ENST00000564228 PANX3Q96QZ0 392 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 POLR3FQ9H1D9 316 aaPredicted RBP11.52□□□□□ -0.57
TCF4-222ENST00000564228 TUT1Q9H6E5 874 aaKnown RBP11.52□□□□□ -0.57
TCF4-222ENST00000564228 DHX33Q9H6R0 707 aaKnown RBP11.52□□□□□ -0.57
TCF4-222ENST00000564228 MANSC1Q9H8J5 431 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 TUBGCP4Q9UGJ1 667 aa11.52□□□□□ -0.57
TCF4-222ENST00000564228 FCHO1O14526 889 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 VILLO15195 856 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 HBP1O60381 514 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 GNRH1P01148 92 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 HNRNPCP07910 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
TCF4-222ENST00000564228 EIF4BP23588 611 aaKnown RBP11.51□□□□□ -0.57
TCF4-222ENST00000564228 CCND3P30281 292 aaPredicted RBP11.51□□□□□ -0.57
TCF4-222ENST00000564228 CPT1AP50416 773 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 CDK18Q07002 472 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 KCNA1Q09470 495 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 DMP1Q13316 513 aaPredicted RBP11.51□□□□□ -0.57
TCF4-222ENST00000564228 ANKRD20A4Q4UJ75 823 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 BRDTQ58F21 947 aaPredicted RBP11.51□□□□□ -0.57
TCF4-222ENST00000564228 BORAQ6PGQ7 559 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 CENPUQ71F23 418 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 DHDDSQ86SQ9 333 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 MAP7D3Q8IWC1 876 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 NUP93Q8N1F7 819 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 NMD3Q96D46 503 aaKnown RBP11.51□□□□□ -0.57
TCF4-222ENST00000564228 FIZ1Q96SL8 496 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 NUP85Q9BW27 656 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 TSSK1BQ9BXA7 367 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 C1orf21Q9H246 121 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 KCNK13Q9HB14 408 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 PDLIM7Q9NR12 457 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 ZNF148Q9UQR1 794 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 DMTF1Q9Y222 760 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 PCDHB13Q9Y5F0 798 aa11.51□□□□□ -0.57
TCF4-222ENST00000564228 CAPN14A8MX76 684 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms