RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 C12orf40Q86WS4 652 aa18.67■□□□□ 0.58
NME3-205ENST00000563854 ADGRG2Q8IZP9 1017 aa18.67■□□□□ 0.58
NME3-205ENST00000563854 FAM160A2Q8N612 972 aaPredicted RBP18.67■□□□□ 0.58
NME3-205ENST00000563854 HEXIM2Q96MH2 286 aaKnown RBP18.67■□□□□ 0.58
NME3-205ENST00000563854 ARID3AQ99856 593 aa18.67■□□□□ 0.58
NME3-205ENST00000563854 TBC1D14Q9P2M4 693 aa18.67■□□□□ 0.58
NME3-205ENST00000563854 KIAA1549LQ6ZVL6 1849 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 FAM92AA1XBS5 289 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 ANTXRLA6NF34 631 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 AXIN1O15169 862 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 SLC16A3O15427 465 aaKnown RBP18.66■□□□□ 0.58
NME3-205ENST00000563854 TBX18O95935 607 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 ZDHHC11BP0C7U3 371 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 FKBP3Q00688 224 aaKnown RBP18.66■□□□□ 0.58
NME3-205ENST00000563854 LMNB2Q03252 620 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 CBWD6Q4V339 395 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 CBWD3Q5JTY5 395 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 CBWD5Q5RIA9 395 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 LY6G5CQ5SRR4 150 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 PPP1R26Q5T8A7 1209 aaPredicted RBP18.66■□□□□ 0.58
NME3-205ENST00000563854 SNX30Q5VWJ9 437 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 RHBDF2Q6PJF5 856 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 SYT13Q7L8C5 426 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 TTC30AQ86WT1 665 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 SFTPA1Q8IWL2 248 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 BBS7Q8IWZ6 715 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 CCDC33Q8N5R6 958 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 CAMKK1Q8N5S9 505 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 GAB3Q8WWW8 586 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 WBP2Q969T9 261 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 CISHQ9NSE2 258 aa18.66■□□□□ 0.58
NME3-205ENST00000563854 CDV3Q9UKY7 258 aaKnown RBP18.66■□□□□ 0.58
NME3-205ENST00000563854 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.66■□□□□ 0.58
NME3-205ENST00000563854 A0A1W2PQH9 124 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 HHLA1C9JL84 531 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 K7EQS6 105 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 APBB3O95704 486 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 APODP05090 189 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 STIM1Q13586 685 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 PUM1Q14671 1186 aaKnown RBP eCLIP18.65■□□□□ 0.58
NME3-205ENST00000563854 ANO4Q32M45 955 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 KLHL10Q6JEL2 608 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 ERMP1Q7Z2K6 904 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 KIAA1958Q8N8K9 716 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 NAT16Q8N8M0 369 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 TSTD1Q8NFU3 115 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 CCDC26Q8TAB7 109 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 USP33Q8TEY7 942 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 TATDN2Q93075 761 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 PNKPQ96T60 521 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 ARHGEF4Q9NR80 690 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 OSER1Q9NX31 292 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 NUDT5Q9UKK9 219 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 SCML2Q9UQR0 700 aa18.65■□□□□ 0.58
NME3-205ENST00000563854 PSMA7O14818 248 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 MDM4O15151 490 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 RARGP13631 454 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 TGM1P22735 817 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 DGKEP52429 567 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 GAD2Q05329 585 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 LRRC63Q05C16 580 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 GOLGA8FQ08AF8 430 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 GOLGA8DPQ0D2H9 430 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 MESP2Q0VG99 397 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 LRMPQ12912 555 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 COBLL1Q53SF7 1204 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 BTBD8Q5XKL5 378 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 CACNA2D4Q7Z3S7 1137 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 KBTBD6Q86V97 674 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 TIGD1Q96MW7 591 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 DUSP16Q9BY84 665 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 TPSD1Q9BZJ3 242 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 NMUR1Q9HB89 426 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 SEMA4GQ9NTN9 838 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 ARMCX3Q9UH62 379 aaPredicted RBP18.64■□□□□ 0.57
NME3-205ENST00000563854 NAGPAQ9UK23 515 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 LSM7Q9UK45 103 aaKnown RBP18.64■□□□□ 0.57
NME3-205ENST00000563854 MAN1B1Q9UKM7 699 aa18.64■□□□□ 0.57
NME3-205ENST00000563854 CCDC163A0A0D9SF12 145 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 KAT7O95251 611 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 TIE1P35590 1138 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 ATP5C1P36542 298 aaKnown RBP18.63■□□□□ 0.57
NME3-205ENST00000563854 CCDC6Q16204 474 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 CCDC40Q4G0X9 1142 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 C10orf120Q5SQS8 335 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 ANO7Q6IWH7 933 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 TTC39CQ8N584 583 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 ALLCQ8N6M5 410 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 SLC4A11Q8NBS3 891 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 SPATA20Q8TB22 786 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 OTUB2Q96DC9 234 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 TMEM176AQ96HP8 235 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 GTPBP4Q9BZE4 634 aaKnown RBP18.63■□□□□ 0.57
NME3-205ENST00000563854 PNPLA8Q9NP80 782 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 ZDHHC4Q9NPG8 344 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 INVSQ9Y283 1065 aa18.63■□□□□ 0.57
NME3-205ENST00000563854 PRR5-ARHGAP8B1AHC4 643 aa18.62■□□□□ 0.57
NME3-205ENST00000563854 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.62■□□□□ 0.57
NME3-205ENST00000563854 KLF8O95600 359 aaPredicted RBP18.62■□□□□ 0.57
NME3-205ENST00000563854 EIF2DP41214 584 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms