RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 CPA2P48052 419 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 VGLL4Q14135 290 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 TBC1D25Q3MII6 688 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 RELL1Q8IUW5 271 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 DTX3LQ8TDB6 740 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 OPTNQ96CV9 577 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 PGBD4Q96DM1 585 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 GPR88Q9GZN0 384 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 B4GALT5O43286 388 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 PSMG1O95456 288 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 LSM8O95777 96 aaKnown RBP10.86□□□□□ -0.67
RNF40-204ENST00000563683 KCNA2P16389 499 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 HSDL1Q3SXM5 330 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 TRABD2AQ86V40 505 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 CDKL3Q8IVW4 592 aaPredicted RBP10.86□□□□□ -0.67
RNF40-204ENST00000563683 KATNAL2Q8IYT4 538 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 NDUFAF2Q8N183 169 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 TRPM4Q8TD43 1214 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 LRRN4Q8WUT4 740 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 CLMNQ96JQ2 1002 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 FAM161BQ96MY7 647 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 ZNF184Q99676 751 aaPredicted RBP10.86□□□□□ -0.67
RNF40-204ENST00000563683 IL1RAPL1Q9NZN1 696 aa10.86□□□□□ -0.67
RNF40-204ENST00000563683 STX18Q9P2W9 335 aaKnown RBP10.86□□□□□ -0.67
RNF40-204ENST00000563683 LACTBL1A8MY62 500 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 ACKR2O00590 384 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 ONECUT3O60422 494 aaPredicted RBP10.85□□□□□ -0.67
RNF40-204ENST00000563683 STIP1P31948 543 aaKnown RBP10.85□□□□□ -0.67
RNF40-204ENST00000563683 EPHB1P54762 984 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 ASPHQ12797 758 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 SEPT6Q14141 434 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 MOB2Q70IA6 237 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 KDELC2Q7Z4H8 507 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 SCUBE3Q8IX30 993 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 FAM172AQ8WUF8 416 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 OLFM3Q96PB7 478 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 MMADHCQ9H3L0 296 aaPredicted RBP10.85□□□□□ -0.67
RNF40-204ENST00000563683 PAK5Q9P286 719 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 STAP1Q9ULZ2 295 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 ZNF536O15090 1300 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 SCN7AQ01118 1682 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 GAS2O43903 313 aaKnown RBP10.85□□□□□ -0.67
RNF40-204ENST00000563683 SETSIPP0DME0 302 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 MIPP30301 263 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 NDST1P52848 882 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 HIRAP54198 1017 aaPredicted RBP10.85□□□□□ -0.67
RNF40-204ENST00000563683 PRPSAP1Q14558 356 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 EEF1DP3Q658K8 133 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 DLK2Q6UY11 383 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 MTDHQ86UE4 582 aaKnown RBP10.85□□□□□ -0.67
RNF40-204ENST00000563683 LRRC6Q86X45 466 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 ERO1BQ86YB8 467 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 MCUQ8NE86 351 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.85□□□□□ -0.678e-8■■□□□ 14.5
RNF40-204ENST00000563683 NSL1Q96IY1 281 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 ASCC2Q9H1I8 757 aaPredicted RBP10.85□□□□□ -0.67
RNF40-204ENST00000563683 MANSC1Q9H8J5 431 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 SLCO1B3Q9NPD5 702 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 SIGLEC16A6NMB1 481 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 CFLARO15519 480 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 VDRP11473 427 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 BOLA3Q53S33 107 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 CLNKQ7Z7G1 428 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 TTC39CQ8N584 583 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 KLHL23Q8NBE8 558 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 MIPOL1Q8TD10 442 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 GATA6Q92908 595 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 CYP4F11Q9HBI6 524 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 PIH1D1Q9NWS0 290 aaKnown RBP10.85□□□□□ -0.67
RNF40-204ENST00000563683 TSPAN16Q9UKR8 245 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 STRCP1A6NGW2 1772 aa10.85□□□□□ -0.67
RNF40-204ENST00000563683 ENO1P06733 434 aaKnown RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 ELK3P41970 407 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 ALDH18A1P54886 795 aaKnown RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 LAMC2Q13753 1193 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 C15orf59Q2T9L4 293 aaPredicted RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 ARL13BQ3SXY8 428 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 SH2D4BQ5SQS7 431 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 JADE1Q6IE81 842 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 FAM131BQ86XD5 332 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 TDRPQ86YL5 185 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 DENND1AQ8TEH3 1009 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 TTC1Q99614 292 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 CADM1Q9BY67 442 aaKnown RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 PCDH9Q9HC56 1237 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 SPON1Q9HCB6 807 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 ARHGAP28Q9P2N2 729 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 FNDC3AQ9Y2H6 1198 aaKnown RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 A0A0B4J269 797 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 H3BRB1 525 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 MAP3K13O43283 966 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 HSPA4LO95757 839 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 CYP2C9P11712 490 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 SULT1E1P49888 294 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 ARPP19P56211 112 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 EFHC2Q5JST6 749 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 FAM182AQ5T1J6 154 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 APPL2Q8NEU8 664 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 REPS2Q8NFH8 660 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 GPRC5AQ8NFJ5 357 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms