RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 PDE1BQ01064 536 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 DCTN2Q13561 401 aaKnown RBP13.22□□□□□ -0.29
CCDC187-201ENST00000563590 MAP7D1Q3KQU3 841 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 FNBP1LQ5T0N5 605 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 SCYL2Q6P3W7 929 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 SIAH1Q8IUQ4 282 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 SULF1Q8IWU6 871 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 FAF2Q96CS3 445 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 TMEM206Q9H813 350 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 PFDN4Q9NQP4 134 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 SLC24A2Q9UI40 661 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 THSD7AQ9UPZ6 1657 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 FOXD2O60548 495 aaPredicted RBP13.21□□□□□ -0.29
CCDC187-201ENST00000563590 KRT37O76014 449 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 RPL7AP62424 266 aaKnown RBP13.21□□□□□ -0.29
CCDC187-201ENST00000563590 MRPS22P82650 360 aaKnown RBP13.21□□□□□ -0.29
CCDC187-201ENST00000563590 MYBPC2Q14324 1141 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 PDK1Q15118 436 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 CDO1Q16878 200 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 NADK2Q4G0N4 442 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 LGSNQ5TDP6 509 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 ACAD11Q709F0 780 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 PTAR1Q7Z6K3 402 aaPredicted RBP13.21□□□□□ -0.29
CCDC187-201ENST00000563590 PPWD1Q96BP3 646 aaKnown RBP13.21□□□□□ -0.29
CCDC187-201ENST00000563590 SERAC1Q96JX3 654 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 ZBTB45Q96K62 511 aaPredicted RBP13.21□□□□□ -0.29
CCDC187-201ENST00000563590 NLRP4Q96MN2 994 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 S100A14Q9HCY8 104 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 RNF181Q9P0P0 153 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 TNRC6CQ9HCJ0 1690 aaKnown RBP13.21□□□□□ -0.29
CCDC187-201ENST00000563590 KBTBD13C9JR72 458 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 F8VP50 259 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 WNT10BO00744 389 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 XPOTO43592 962 aaKnown RBP13.21□□□□□ -0.29
CCDC187-201ENST00000563590 PROSCO94903 275 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 SERPINB8P50452 374 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 SLC18A1P54219 525 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 TGFB2P61812 414 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 RPL10AP62906 217 aaKnown RBP13.21□□□□□ -0.29
CCDC187-201ENST00000563590 NRF1Q16656 503 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 CYP4A22Q5TCH4 519 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 ACTL9Q8TC94 416 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 USP13Q92995 863 aaPredicted RBP13.21□□□□□ -0.29
CCDC187-201ENST00000563590 WRNIP1Q96S55 665 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 VPS11Q9H270 941 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 MAN1C1Q9NR34 630 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 DNAJC16Q9Y2G8 782 aa13.21□□□□□ -0.29
CCDC187-201ENST00000563590 FKBP6O75344 327 aa13.21□□□□□ -0.3
CCDC187-201ENST00000563590 TOP3BO95985 862 aaKnown RBP13.21□□□□□ -0.3
CCDC187-201ENST00000563590 EGFRP00533 1210 aa13.21□□□□□ -0.3
CCDC187-201ENST00000563590 TFPTP0C1Z6 253 aa13.21□□□□□ -0.3
CCDC187-201ENST00000563590 MX2P20592 715 aa13.21□□□□□ -0.3
CCDC187-201ENST00000563590 KCNA4P22459 653 aa13.21□□□□□ -0.3
CCDC187-201ENST00000563590 GNA15P30679 374 aa13.21□□□□□ -0.3
CCDC187-201ENST00000563590 OTUD4Q01804 1114 aaKnown RBP13.21□□□□□ -0.3
CCDC187-201ENST00000563590 TNFAIP1Q13829 316 aa13.21□□□□□ -0.3
CCDC187-201ENST00000563590 SPDYAQ5MJ70 313 aa13.21□□□□□ -0.3
CCDC187-201ENST00000563590 KLHDC10Q6PID8 442 aa13.21□□□□□ -0.3
CCDC187-201ENST00000563590 USP37Q86T82 979 aa13.21□□□□□ -0.3
CCDC187-201ENST00000563590 DEPTORQ8TB45 409 aa13.21□□□□□ -0.3
CCDC187-201ENST00000563590 COPS7BQ9H9Q2 264 aaPredicted RBP13.21□□□□□ -0.3
CCDC187-201ENST00000563590 TELO2Q9Y4R8 837 aa13.21□□□□□ -0.3
CCDC187-201ENST00000563590 HEY1Q9Y5J3 304 aa13.21□□□□□ -0.3
CCDC187-201ENST00000563590 E9PBE3 544 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 TM9SF1O15321 606 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 LIASO43766 372 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 KLHL41O60662 606 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 ENO3P13929 434 aaPredicted RBP13.2□□□□□ -0.3
CCDC187-201ENST00000563590 ACTR3P61158 418 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 PSMC5P62195 406 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 HPCAP84074 193 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 ATP1A4Q13733 1029 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 SEPT6Q14141 434 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 MSS51Q4VC12 460 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 AMIGO2Q86SJ2 522 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 MKL1Q969V6 931 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 CCDC97Q96F63 343 aaPredicted RBP13.2□□□□□ -0.3
CCDC187-201ENST00000563590 ACSS2Q9NR19 701 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 NYAP2Q9P242 653 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 GOLGA8QA0A0J9YX86 632 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 GOLGA8OA6NCC3 632 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 GOLGA8NF8WBI6 632 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 INO80B-WBP1J3KQ70 363 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 FGFR3P22607 806 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 MORF4L2Q15014 288 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 C6orf52Q5T4I8 152 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 ANGEL2Q5VTE6 544 aaKnown RBP13.2□□□□□ -0.3
CCDC187-201ENST00000563590 KCTD17Q8N5Z5 321 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 INO80BQ9C086 356 aaPredicted RBP13.2□□□□□ -0.3
CCDC187-201ENST00000563590 RNF146Q9NTX7 359 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 TXNDC16Q9P2K2 825 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 ZNF232Q9UNY5 417 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 FIS1Q9Y3D6 152 aa13.2□□□□□ -0.3
CCDC187-201ENST00000563590 A0A0J9YVX5 310 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 GRAP2O75791 330 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 CFHP08603 1231 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 UNGP13051 313 aaPredicted RBP13.19□□□□□ -0.3
CCDC187-201ENST00000563590 GRIA2P42262 883 aa13.19□□□□□ -0.3
CCDC187-201ENST00000563590 QARSP47897 775 aaKnown RBP13.19□□□□□ -0.3
CCDC187-201ENST00000563590 GPX6P59796 221 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms