RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TGS1Q96RS0 853 aaKnown RBP10.65□□□□□ -0.71
SMG1-208ENST00000563448 TCF25Q9BQ70 676 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 C11orf84Q9BUA3 381 aaPredicted RBP10.65□□□□□ -0.71
SMG1-208ENST00000563448 DDX23Q9BUQ8 820 aaKnown RBP10.65□□□□□ -0.71
SMG1-208ENST00000563448 PBX4Q9BYU1 374 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 ADAM33Q9BZ11 813 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 L2HGDHQ9H9P8 463 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 POPDC2Q9HBU9 364 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.65□□□□□ -0.711e-7■■■□□ 15.9
SMG1-208ENST00000563448 IL37Q9NZH6 218 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 HSFX1Q9UBD0 423 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 PCDHA3Q9Y5H8 950 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 IRAK3Q9Y616 596 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 MYO7AQ13402 2215 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.64□□□□□ -0.71
SMG1-208ENST00000563448 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.64□□□□□ -0.71
SMG1-208ENST00000563448 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.64□□□□□ -0.71
SMG1-208ENST00000563448 CCDC66A2RUB6 948 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 KCNK3O14649 394 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 FSCN2O14926 492 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 GRM6O15303 877 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 LRCH4O75427 683 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 CSPG5O95196 566 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 LTFP02788 710 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 TCP1P17987 556 aaKnown RBP10.64□□□□□ -0.71
SMG1-208ENST00000563448 TFE3P19532 575 aaPredicted RBP10.64□□□□□ -0.71
SMG1-208ENST00000563448 SDC4P31431 198 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 MATKP42679 507 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 PTPN9P43378 593 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 TUFMP49411 452 aaKnown RBP10.64□□□□□ -0.71
SMG1-208ENST00000563448 ERVK-21P61565 698 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 RPL10AP62906 217 aaKnown RBP10.64□□□□□ -0.71
SMG1-208ENST00000563448 UBE3AQ05086 875 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 MTMR3Q13615 1198 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 CAMK1Q14012 370 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 ACAP1Q15027 740 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 PLPP4Q5VZY2 271 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 DENND5BQ6ZUT9 1274 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 GIPC2Q8TF65 315 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 SAMD11Q96NU1 681 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 CNPY3Q9BT09 278 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 CYP4F11Q9HBI6 524 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 ENTPD7Q9NQZ7 604 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 NAALADL1Q9UQQ1 740 aa10.64□□□□□ -0.71
SMG1-208ENST00000563448 FAM92AA1XBS5 289 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 C2orf71A6NGG8 1288 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 SLC38A8A6NNN8 435 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 HIDE1A8MVS5 230 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 SART1O43290 800 aaKnown RBP10.63□□□□□ -0.71
SMG1-208ENST00000563448 BMP8BP34820 402 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 NOS2P35228 1153 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 SSR1P43307 286 aaKnown RBP10.63□□□□□ -0.71
SMG1-208ENST00000563448 PGFP49763 221 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 ATP11AP98196 1134 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 SMC1AQ14683 1233 aaKnown RBP10.63□□□□□ -0.71
SMG1-208ENST00000563448 CDO1Q16878 200 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 DCAF6Q58WW2 860 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 OTUD1Q5VV17 481 aaPredicted RBP10.63□□□□□ -0.71
SMG1-208ENST00000563448 SYPL2Q5VXT5 272 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 SCD5Q86SK9 330 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 CREG2Q8IUH2 290 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 RHOT1Q8IXI2 618 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 UBL4BQ8N7F7 174 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 CENPIQ92674 756 aaPredicted RBP10.63□□□□□ -0.71
SMG1-208ENST00000563448 CAPZA3Q96KX2 299 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 NKX2-4Q9H2Z4 354 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 FBXO44Q9H4M3 255 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 NMUR1Q9HB89 426 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 TLR9Q9NR96 1032 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 CALCOCO1Q9P1Z2 691 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 NOTCH4Q99466 2003 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 RIOK3O14730 519 aaKnown RBP10.63□□□□□ -0.71
SMG1-208ENST00000563448 TGM5O43548 720 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 PSTPIP1O43586 416 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 RNF8O76064 485 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 RTN3O95197 1032 aaPredicted RBP10.63□□□□□ -0.71
SMG1-208ENST00000563448 SPATA31D3P0C874 917 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 IL1R2P27930 398 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 IRS1P35568 1242 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 SULT1E1P49888 294 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 PITX1P78337 314 aaPredicted RBP10.63□□□□□ -0.71
SMG1-208ENST00000563448 SLC25A11Q02978 314 aaKnown RBP10.63□□□□□ -0.71
SMG1-208ENST00000563448 GPM6BQ13491 265 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 TUBB2AQ13885 445 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 ATP13A4Q4VNC1 1196 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 BSPRYQ5W0U4 402 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 TXNRD3NBQ6F5E7 133 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 LILRA6Q6PI73 481 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 SPATA31D4Q6ZUB0 917 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 BNIPLQ7Z465 357 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 TCEAL8Q8IYN2 117 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 MRPL43Q8N983 215 aaKnown RBP10.63□□□□□ -0.71
SMG1-208ENST00000563448 FAM172AQ8WUF8 416 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 EDEM1Q92611 657 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 NT5C3BQ969T7 300 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 MS4A14Q96JA4 679 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 PBKQ96KB5 322 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 TBCBQ99426 244 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 NPY6RQ99463 290 aa10.63□□□□□ -0.71
SMG1-208ENST00000563448 TUBB2BQ9BVA1 445 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms