RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 WBP2Q969T9 261 aa9□□□□□ -0.97
UBR1-204ENST00000563239 PBXIP1Q96AQ6 731 aa9□□□□□ -0.97
UBR1-204ENST00000563239 CHFRQ96EP1 664 aa9□□□□□ -0.97
UBR1-204ENST00000563239 NAP1L5Q96NT1 182 aaPredicted RBP9□□□□□ -0.97
UBR1-204ENST00000563239 ERGIC2Q96RQ1 377 aa9□□□□□ -0.97
UBR1-204ENST00000563239 STK33Q9BYT3 514 aa9□□□□□ -0.97
UBR1-204ENST00000563239 ULBP1Q9BZM6 244 aa9□□□□□ -0.97
UBR1-204ENST00000563239 KIF9Q9HAQ2 790 aa9□□□□□ -0.97
UBR1-204ENST00000563239 CYLDQ9NQC7 956 aa9□□□□□ -0.97
UBR1-204ENST00000563239 HPS4Q9NQG7 708 aa9□□□□□ -0.97
UBR1-204ENST00000563239 ARHGEF3Q9NR81 526 aa9□□□□□ -0.97
UBR1-204ENST00000563239 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9□□□□□ -0.97
UBR1-204ENST00000563239 HESX1Q9UBX0 185 aa9□□□□□ -0.97
UBR1-204ENST00000563239 ARIH1Q9Y4X5 557 aaPredicted RBP9□□□□□ -0.97
UBR1-204ENST00000563239 M0QYV0 167 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 LEFTY2O00292 366 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 DPYSL4O14531 572 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 ZNF263O14978 683 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 PI15O43692 258 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 GREM1O60565 184 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 RARGP13631 454 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 GNA15P30679 374 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 USP8P40818 1118 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 RGS7P49802 495 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 VCPP55072 806 aaKnown RBP8.99□□□□□ -0.97
UBR1-204ENST00000563239 JAM2P57087 298 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 PFKPQ01813 784 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 UBXN1Q04323 297 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 TNK2Q07912 1038 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 MTF1Q14872 753 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 STILQ15468 1287 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 MLF2Q15773 248 aaPredicted RBP8.99□□□□□ -0.97
UBR1-204ENST00000563239 MEA1Q16626 185 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 ARHGAP29Q52LW3 1261 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 FKBP15Q5T1M5 1219 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 TRIM68Q6AZZ1 485 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 ZNF687Q8N1G0 1237 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 SCML4Q8N228 414 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 FBXL6Q8N531 539 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 ZNF276Q8N554 614 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 DDX1Q92499 740 aaKnown RBP8.99□□□□□ -0.97
UBR1-204ENST00000563239 IRF7Q92985 503 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 KLF16Q9BXK1 252 aaPredicted RBP8.99□□□□□ -0.97
UBR1-204ENST00000563239 LINC00597Q9H2U6 94 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 BRD9Q9H8M2 597 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 TLR8Q9NR97 1041 aaKnown RBP8.99□□□□□ -0.97
UBR1-204ENST00000563239 HEBP1Q9NRV9 189 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 GKN1Q9NS71 199 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 FAM207AQ9NSI2 230 aaPredicted RBP8.99□□□□□ -0.97
UBR1-204ENST00000563239 SMPD4Q9NXE4 827 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 GTSE1Q9NYZ3 720 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 NUDT5Q9UKK9 219 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 FBXL21Q9UKT6 434 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 PCDHGC3Q9UN70 934 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 MTF2Q9Y483 593 aaPredicted RBP8.99□□□□□ -0.97
UBR1-204ENST00000563239 CPQQ9Y646 472 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 MYH10P35580 1976 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 MUC6Q6W4X9 2439 aa8.99□□□□□ -0.97
UBR1-204ENST00000563239 HELZP42694 1942 aaKnown RBP8.98□□□□□ -0.97
UBR1-204ENST00000563239 A0A1B0GTH6 734 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 YJEFN3A6XGL0 299 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 E7ENQ6 273 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 F8VZ95 297 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 PIK3R2O00459 728 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 MDM4O15151 490 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 THAP12O43422 761 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 TLR5O60602 858 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 ZBED1O96006 694 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 LCP1P13796 627 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 ARSAP15289 507 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 CD72P21854 359 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 RFX1P22670 979 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 SOX9P48436 509 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 PDE6CP51160 858 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 MLLT6P55198 1093 aaPredicted RBP8.98□□□□□ -0.97
UBR1-204ENST00000563239 SLC8A3P57103 927 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 DAOAP59103 153 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 POLR2FP61218 127 aaKnown RBP8.98□□□□□ -0.97
UBR1-204ENST00000563239 PRKCQQ04759 706 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 ADIGQ0VDE8 80 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 FZD5Q13467 585 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 RAPGEF1Q13905 1077 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 NR1I3Q14994 352 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 EML3Q32P44 896 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 YAF2Q8IY57 180 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 TMEM105Q8N8V8 129 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 ANKRD20A12PQ8NF67 263 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 TTC8Q8TAM2 541 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 CLEC4CQ8WTT0 213 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 STK32AQ8WU08 396 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 OSCP1Q8WVF1 389 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 HSFY1Q96LI6 401 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 SLC4A5Q9BY07 1137 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 FOXQ1Q9C009 403 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 EBF3Q9H4W6 596 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 TBC1D17Q9HA65 648 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 LRRC4Q9HBW1 653 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 CLIC5Q9NZA1 410 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 DLGAP2Q9P1A6 1054 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 CFAP97Q9P2B7 532 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms