RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 FAM227BQ96M60 508 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 MAGEB5Q9BZ81 275 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 INO80BQ9C086 356 aaPredicted RBP3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 WDR12Q9GZL7 423 aaKnown RBP3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 TM7SF3Q9NS93 570 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 LRIT1Q9P2V4 623 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 VPS51Q9UID3 782 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 MAN2B2Q9Y2E5 1009 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 CEP83Q9Y592 693 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 SNX14Q9Y5W7 946 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 A1L4Q6 167 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 MGST3O14880 152 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 FGAP02671 866 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 CHRM2P08172 466 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 PCSK6P29122 969 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 ADORA2AP29274 412 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 EPHA3P29320 983 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 PRKAR1BP31321 381 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 RENBPP51606 427 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 GRM1Q13255 1194 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 BIRC3Q13489 604 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 BMPR2Q13873 1038 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 STARD3Q14849 445 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 KRT72Q14CN4 511 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 MANEALQ5VSG8 457 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 ARHGEF25Q86VW2 580 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 ZNF354CQ86Y25 554 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 TXLNBQ8N3L3 684 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 TMEM171Q8WVE6 324 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 TFAP2BQ92481 460 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 GLG1Q92896 1179 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 ZNF566Q969W8 418 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 C18orf8Q96DM3 657 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 RSPRY1Q96DX4 576 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 LRRC46Q96FV0 321 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 TMEM41AQ96HV5 264 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 HERPUD2Q9BSE4 406 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 TTLL2Q9BWV7 592 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 STK33Q9BYT3 514 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 ZCWPW1Q9H0M4 648 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 AS3MTQ9HBK9 375 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 GLOD4Q9HC38 313 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 ZBTB26Q9HCK0 441 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 TRIM36Q9NQ86 728 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 NECTIN3Q9NQS3 549 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 RGL1Q9NZL6 768 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 DKK3Q9UBP4 350 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 GABRQQ9UN88 632 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 HPSEQ9Y251 543 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 FRMD4BQ9Y2L6 1034 aa3.84□□□□□ -1.79
SHCBP1-202ENST00000563219 A0A087WV62 115 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 ADAMTS3O15072 1205 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 RGS10O43665 173 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 PROP1O75360 226 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 TJP3O95049 919 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 ERBB2P04626 1255 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 IL6RP08887 468 aaPredicted RBP3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 IDEP14735 1019 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 ZFXP17010 805 aaPredicted RBP3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 SLC5A2P31639 672 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 UQCRC1P31930 480 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 LIPAP38571 399 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 GRIA3P42263 894 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 TECP42680 631 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 ITGA8P53708 1063 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 TIRAPP58753 221 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 EIF2B5Q13144 721 aaKnown RBP3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 KCNAB1Q14722 419 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 CCDC38Q502W7 563 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 PLAC9Q5JTB6 97 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 TREML2Q5T2D2 321 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 DEPDC1Q5TB30 811 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 KAZNQ674X7 775 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 MRNIPQ6NTE8 343 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 CRTC1Q6UUV9 634 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 LDHAL6AQ6ZMR3 332 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 ZNF551Q7Z340 670 aaPredicted RBP3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 SMAP1Q8IYB5 467 aaPredicted RBP3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 SYTL1Q8IYJ3 562 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 GLIS1Q8NBF1 620 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 CCDC150Q8NCX0 1101 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 ACTRT2Q8TDY3 377 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 SNX27Q96L92 541 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 NAP1L4Q99733 375 aaKnown RBP3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 C17orf80Q9BSJ5 609 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 VN1R3Q9BXE9 311 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 SERTAD4Q9NUC0 356 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 SLC17A6Q9P2U8 582 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 DNAJB11Q9UBS4 358 aa3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 POLR2AP24928 1970 aaKnown RBP3.83□□□□□ -1.8
SHCBP1-202ENST00000563219 FAM234BA2RU67 622 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 OR2W5A6NFC9 320 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 LRRC3CA6NJW4 275 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 M0R3H8 397 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 ORC4O43929 436 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 RBMXL2O75526 392 aaKnown RBP3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 URI1O94763 535 aaPredicted RBP3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 NDST3O95803 873 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 ARP10275 920 aa3.82□□□□□ -1.8
SHCBP1-202ENST00000563219 NR2F6P10588 404 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms