RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SLC30A5Q8TAD4 765 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 ACSF2Q96CM8 615 aaPredicted RBP19.76■□□□□ 0.75
RAB40C-207ENST00000563109 CCDC42Q96M95 316 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 C11orf70Q9BRQ4 267 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 TRPC7Q9HCX4 862 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 ADAM22Q9P0K1 906 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 CHORDC1Q9UHD1 332 aaPredicted RBP19.76■□□□□ 0.75
RAB40C-207ENST00000563109 ADAMTS1Q9UHI8 967 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 NAGPAQ9UK23 515 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 NR2E1Q9Y466 385 aa19.76■□□□□ 0.75
RAB40C-207ENST00000563109 A0A1W2PQH9 124 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 SOBPA7XYQ1 873 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 TMCO5BA8MYB1 307 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 PAPSS1O43252 624 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-207ENST00000563109 GABBR2O75899 941 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 RALAP11233 206 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 GZMAP12544 262 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 MMP8P22894 467 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 GABRB2P47870 512 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 YWHAGP61981 247 aaKnown RBP eCLIP19.75■□□□□ 0.75
RAB40C-207ENST00000563109 C1QBPQ07021 282 aaKnown RBP19.75■□□□□ 0.75
RAB40C-207ENST00000563109 FAM183BPQ6ZVS7 135 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 TMEM150AQ86TG1 271 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 TADA2BQ86TJ2 420 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 NPAS3Q8IXF0 933 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 TDRD5Q8NAT2 981 aaKnown RBP19.75■□□□□ 0.75
RAB40C-207ENST00000563109 OLIG1Q8TAK6 271 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 ATXN2LQ8WWM7 1075 aaKnown RBP19.75■□□□□ 0.75
RAB40C-207ENST00000563109 FGF13Q92913 245 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 FAM149B1Q96BN6 582 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 CDK5RAP1Q96SZ6 601 aaKnown RBP19.75■□□□□ 0.75
RAB40C-207ENST00000563109 CHP1Q99653 195 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 PHF7Q9BWX1 381 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-207ENST00000563109 TASP1Q9H6P5 420 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 NHEJ1Q9H9Q4 299 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-207ENST00000563109 GDE1Q9NZC3 331 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 TJP2Q9UDY2 1190 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 CDH7Q9ULB5 785 aa19.75■□□□□ 0.75
RAB40C-207ENST00000563109 ZFP37Q9Y6Q3 630 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-207ENST00000563109 NUP210Q8TEM1 1887 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-207ENST00000563109 TRAV19A0A0A6YYK7 116 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 RTN2O75298 545 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 MOSPD3O75425 235 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 LTFP02788 710 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 ZDHHC11BP0C7U3 371 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 PFKLP17858 780 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 TUBP50607 506 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 SLC18A3Q16572 532 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 EFHC1Q5JVL4 640 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 HECTD3Q5T447 861 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 SNX30Q5VWJ9 437 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 BTBD8Q5XKL5 378 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 CLEC4CQ8WTT0 213 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 NDRG1Q92597 394 aaKnown RBP19.74■□□□□ 0.75
RAB40C-207ENST00000563109 TRIM11Q96F44 468 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 NACA2Q9H009 215 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 CLIC5Q9NZA1 410 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 WDR35Q9P2L0 1181 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 USTQ9Y2C2 406 aa19.74■□□□□ 0.75
RAB40C-207ENST00000563109 HELZP42694 1942 aaKnown RBP19.73■□□□□ 0.75
RAB40C-207ENST00000563109 A0A087X0T9 212 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 YJEFN3A6XGL0 299 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 E7ENQ6 273 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 FAM228BP0C875 321 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 RARGP13631 454 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 AVPR1AP37288 418 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 SLC6A3Q01959 620 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 FAM102AQ5T9C2 384 aaPredicted RBP19.73■□□□□ 0.75
RAB40C-207ENST00000563109 TXNDC8Q6A555 127 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 OLFML1Q6UWY5 402 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 MON1BQ7L1V2 547 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 RSRC2Q7L4I2 434 aaKnown RBP19.73■□□□□ 0.75
RAB40C-207ENST00000563109 SCD5Q86SK9 330 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 XYLT1Q86Y38 959 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 TMTC1Q8IUR5 882 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 MAB21L3Q8N8X9 362 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 MCRS1Q96EZ8 462 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 BAG1Q99933 345 aaPredicted RBP19.73■□□□□ 0.75
RAB40C-207ENST00000563109 NMUR1Q9HB89 426 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 ABCC13Q9NSE7 274 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 TAS2R14Q9NYV8 317 aa19.73■□□□□ 0.75
RAB40C-207ENST00000563109 GOLGA8SH3BPF8 625 aa19.72■□□□□ 0.75
RAB40C-207ENST00000563109 NRG2O14511 850 aaPredicted RBP19.72■□□□□ 0.75
RAB40C-207ENST00000563109 TLR5O60602 858 aa19.72■□□□□ 0.75
RAB40C-207ENST00000563109 HSF2BPO75031 334 aa19.72■□□□□ 0.75
RAB40C-207ENST00000563109 FTLP02792 175 aaPredicted RBP19.72■□□□□ 0.75
RAB40C-207ENST00000563109 CKMP06732 381 aa19.72■□□□□ 0.75
RAB40C-207ENST00000563109 GLI1P08151 1106 aa19.72■□□□□ 0.75
RAB40C-207ENST00000563109 IL9P15248 144 aa19.72■□□□□ 0.75
RAB40C-207ENST00000563109 SP100P23497 879 aaPredicted RBP19.72■□□□□ 0.75
RAB40C-207ENST00000563109 CYLC1P35663 651 aaPredicted RBP19.72■□□□□ 0.75
RAB40C-207ENST00000563109 SCNN1AP37088 669 aa19.72■□□□□ 0.75
RAB40C-207ENST00000563109 KCNQ1P51787 676 aa19.72■□□□□ 0.75
RAB40C-207ENST00000563109 GFPT1Q06210 699 aaPredicted RBP19.72■□□□□ 0.75
RAB40C-207ENST00000563109 ZNF268Q14587 947 aaPredicted RBP19.72■□□□□ 0.75
RAB40C-207ENST00000563109 C2CD6Q53TS8 623 aa19.72■□□□□ 0.75
RAB40C-207ENST00000563109 CCDC122Q5T0U0 273 aa19.72■□□□□ 0.75
RAB40C-207ENST00000563109 STXBP5Q5T5C0 1151 aa19.72■□□□□ 0.75
RAB40C-207ENST00000563109 BSPRYQ5W0U4 402 aa19.72■□□□□ 0.75
RAB40C-207ENST00000563109 ALKBH5Q6P6C2 394 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms