RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 Q4G0T1 1027 aa5.33□□□□□ -1.56
CHD9-206ENST00000562791 MTHFD1LQ6UB35 978 aa5.33□□□□□ -1.56
CHD9-206ENST00000562791 KRBA2Q6ZNG9 492 aa5.33□□□□□ -1.56
CHD9-206ENST00000562791 SPARTQ8N0X7 666 aa5.33□□□□□ -1.56
CHD9-206ENST00000562791 MNS1Q8NEH6 495 aa5.33□□□□□ -1.56
CHD9-206ENST00000562791 SPSB4Q96A44 273 aa5.33□□□□□ -1.56
CHD9-206ENST00000562791 RSPRY1Q96DX4 576 aa5.33□□□□□ -1.56
CHD9-206ENST00000562791 UBA5Q9GZZ9 404 aa5.33□□□□□ -1.56
CHD9-206ENST00000562791 VPS16Q9H269 839 aa5.33□□□□□ -1.56
CHD9-206ENST00000562791 ZSCAN32Q9NX65 697 aa5.33□□□□□ -1.56
CHD9-206ENST00000562791 ANAPC4Q9UJX5 808 aa5.33□□□□□ -1.56
CHD9-206ENST00000562791 AMFRQ9UKV5 643 aa5.33□□□□□ -1.56
CHD9-206ENST00000562791 DRG1Q9Y295 367 aaKnown RBP5.33□□□□□ -1.56
CHD9-206ENST00000562791 EEA1Q15075 1411 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 RAD50Q92878 1312 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 CYP2D7A0A087X1C5 515 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 TRIM43BA6NCK2 446 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 KRTAP29-1A8MX34 341 aaPredicted RBP5.32□□□□□ -1.56
CHD9-206ENST00000562791 CCER2I3L3R5 266 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 CES2O00748 559 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 CTAGE5O15320 804 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 COQ9O75208 318 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 CHRM5P08912 532 aaPredicted RBP5.32□□□□□ -1.56
CHD9-206ENST00000562791 MYCLP12524 364 aaPredicted RBP5.32□□□□□ -1.56
CHD9-206ENST00000562791 LMAN2Q12907 356 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 CCNIQ14094 377 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 FAM187BQ17R55 369 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 PLEKHG6Q3KR16 790 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 CERKLQ49MI3 558 aaPredicted RBP5.32□□□□□ -1.56
CHD9-206ENST00000562791 AWAT1Q58HT5 328 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 CACHD1Q5VU97 1274 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 CXorf57Q6NSI4 855 aaKnown RBP5.32□□□□□ -1.56
CHD9-206ENST00000562791 MIS18BP1Q6P0N0 1132 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 SIRT6Q8N6T7 355 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 TRIM43Q96BQ3 446 aaPredicted RBP5.32□□□□□ -1.56
CHD9-206ENST00000562791 ZBTB9Q96C00 473 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 CTHRC1Q96CG8 243 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 FCRL4Q96PJ5 515 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 EFHD1Q9BUP0 239 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 A1CFQ9NQ94 594 aaKnown RBP5.32□□□□□ -1.56
CHD9-206ENST00000562791 XPNPEP3Q9NQH7 507 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 SMC4Q9NTJ3 1288 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 SACM1LQ9NTJ5 587 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 DONSONQ9NYP3 566 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 ELOVL5Q9NYP7 299 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 SCAF8Q9UPN6 1271 aaKnown RBP5.32□□□□□ -1.56
CHD9-206ENST00000562791 RPS6KL1Q9Y6S9 549 aa5.32□□□□□ -1.56
CHD9-206ENST00000562791 MBD3L4A6NDZ8 208 aaPredicted RBP5.31□□□□□ -1.56
CHD9-206ENST00000562791 MBD3L3A6NE82 208 aaPredicted RBP5.31□□□□□ -1.56
CHD9-206ENST00000562791 E5RJQ4 531 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 UBE2Q2LH0YL09 131 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 PYCARD-AS1I3L0S3 204 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 AGPSO00116 658 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 EXOC5O00471 708 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 DYNC1I1O14576 645 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 CD3EAPO15446 510 aaKnown RBP5.31□□□□□ -1.56
CHD9-206ENST00000562791 SPRY2O43597 315 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 ZNF853P0CG23 659 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 BRAFP15056 766 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 CD151P48509 253 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 ITGA8P53708 1063 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 C3orf38Q5JPI3 329 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 FAM102BQ5T8I3 360 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 WDR78Q5VTH9 848 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 ZNF280DQ6N043 979 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 PTCHD4Q6ZW05 846 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 SFTPA1Q8IWL2 248 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 LSM14AQ8ND56 463 aaKnown RBP5.31□□□□□ -1.56
CHD9-206ENST00000562791 WDYHV1Q96HA8 205 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 ZBTB45Q96K62 511 aaPredicted RBP5.31□□□□□ -1.56
CHD9-206ENST00000562791 PPP1R9BQ96SB3 815 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 VN1R3Q9BXE9 311 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 TRIM5Q9C035 493 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 DDX20Q9UHI6 824 aaKnown RBP5.31□□□□□ -1.56
CHD9-206ENST00000562791 L1RE1Q9UN81 338 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 SMC3Q9UQE7 1217 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 KNSTRNQ9Y448 316 aa5.31□□□□□ -1.56
CHD9-206ENST00000562791 CFAP69A5D8W1 941 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 FCHO1O14526 889 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 PPEF2O14830 753 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 IPO8O15397 1037 aaKnown RBP5.3□□□□□ -1.56
CHD9-206ENST00000562791 RASAL1O95294 804 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 APEHP13798 732 aaKnown RBP5.3□□□□□ -1.56
CHD9-206ENST00000562791 HGFP14210 728 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 ATP5F1P24539 256 aaPredicted RBP5.3□□□□□ -1.56
CHD9-206ENST00000562791 KLRC1P26715 233 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 UQCRC1P31930 480 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 MMP13P45452 471 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 DIO1P49895 249 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 RIPK4P57078 832 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 RPS16P62249 146 aaKnown RBP5.3□□□□□ -1.56
CHD9-206ENST00000562791 NFE2Q16621 373 aaPredicted RBP5.3□□□□□ -1.56
CHD9-206ENST00000562791 PNISRQ8TF01 805 aaKnown RBP5.3□□□□□ -1.56
CHD9-206ENST00000562791 NMD3Q96D46 503 aaKnown RBP5.3□□□□□ -1.56
CHD9-206ENST00000562791 SUCLG2Q96I99 432 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 STK31Q9BXU1 1019 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 WDR26Q9H7D7 661 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 MED4Q9NPJ6 270 aa5.3□□□□□ -1.56
CHD9-206ENST00000562791 KIF3AQ9Y496 699 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms