RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 C11orf57Q6ZUT1 292 aaPredicted RBP17.49■□□□□ 0.39
CDT1-202ENST00000562747 RRAGAQ7L523 313 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 ENOSF1Q7L5Y1 443 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 YAF2Q8IY57 180 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 SCAMP5Q8TAC9 235 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 BPIFB1Q8TDL5 484 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 KAT5Q92993 513 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 FBXO32Q969P5 355 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 LRRC3BQ96PB8 259 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 IER2Q9BTL4 223 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 NDST4Q9H3R1 872 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 TDP1Q9NUW8 608 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 PCDHB4Q9Y5E5 795 aa17.49■□□□□ 0.39
CDT1-202ENST00000562747 CHURC1-FNTBB4DL54 471 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 HHLA1C9JL84 531 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 CHADO15335 359 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 USP17L7P0C7H9 530 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 SDHBP21912 280 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 FNTBP49356 437 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 NRLP54845 237 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 SLC8A3P57103 927 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 TYRO3Q06418 890 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 KLHL40Q2TBA0 621 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 HSP90AA4PQ58FG1 418 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 MIIPQ5JXC2 388 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 SMYD5Q6GMV2 418 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 TXNDC11Q6PKC3 985 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 PRR23BQ6ZRT6 265 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 ANKRD52Q8NB46 1076 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 USP13Q92995 863 aaPredicted RBP17.48■□□□□ 0.39
CDT1-202ENST00000562747 KREMEN1Q96MU8 473 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 RTKNQ9BST9 563 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 CRACR2AQ9BSW2 395 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 UBXN6Q9BZV1 441 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 UBE2TQ9NPD8 197 aaPredicted RBP17.48■□□□□ 0.39
CDT1-202ENST00000562747 ACACBO00763 2458 aa17.48■□□□□ 0.39
CDT1-202ENST00000562747 C2orf78A6NCI8 922 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 K7ESF4 209 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 HRO43593 1189 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 CKMP06732 381 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 CD19P15391 556 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 HDCP19113 662 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 SLC9A1P19634 815 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 CXCL12P48061 93 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 MFAP3P55082 362 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 PLCB2Q00722 1185 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 MYL5Q02045 173 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 ARHGAP29Q52LW3 1261 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 CDKAL1Q5VV42 579 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 SNX30Q5VWJ9 437 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 TTC8Q8TAM2 541 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 SMG9Q9H0W8 520 aaKnown RBP17.47■□□□□ 0.39
CDT1-202ENST00000562747 THG1LQ9NWX6 298 aaKnown RBP17.47■□□□□ 0.39
CDT1-202ENST00000562747 APEX2Q9UBZ4 518 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 CNTN6Q9UQ52 1028 aa17.47■□□□□ 0.39
CDT1-202ENST00000562747 TPRP12270 2363 aaKnown RBP17.47■□□□□ 0.39
CDT1-202ENST00000562747 ZFHX4Q86UP3 3567 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 OLFM2O95897 454 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 OAS1P00973 400 aaKnown RBP17.46■□□□□ 0.39
CDT1-202ENST00000562747 ZDHHC11BP0C7U3 371 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 TCF3P15923 654 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 PON1P27169 355 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 TUBP50607 506 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 ZNF132P52740 706 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 BCAT1P54687 386 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 PPP2R5DQ14738 602 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 STILQ15468 1287 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 GOLGA7BQ2TAP0 167 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 GPRIN1Q7Z2K8 1008 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 SPEM1Q8N4L4 309 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 ARL14EPQ8N8R7 260 aaPredicted RBP17.46■□□□□ 0.39
CDT1-202ENST00000562747 RBBP8NLQ8NC74 664 aaPredicted RBP17.46■□□□□ 0.39
CDT1-202ENST00000562747 ZFYVE19Q96K21 471 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 SLC22A12Q96S37 553 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 CYP2S1Q96SQ9 504 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 NAT10Q9H0A0 1025 aaKnown RBP17.46■□□□□ 0.39
CDT1-202ENST00000562747 HESX1Q9UBX0 185 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 TSPAN16Q9UKR8 245 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 RAB23Q9ULC3 237 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 ARHGAP26Q9UNA1 814 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 SCML2Q9UQR0 700 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 CCL26Q9Y258 94 aa17.46■□□□□ 0.39
CDT1-202ENST00000562747 RNF225M0QZC1 329 aaPredicted RBP17.45■□□□□ 0.38
CDT1-202ENST00000562747 O00370 1275 aa17.45■□□□□ 0.38
CDT1-202ENST00000562747 LETM1O95202 739 aaPredicted RBP17.45■□□□□ 0.38
CDT1-202ENST00000562747 ABL1P00519 1130 aa17.45■□□□□ 0.38
CDT1-202ENST00000562747 RETP07949 1114 aa17.45■□□□□ 0.38
CDT1-202ENST00000562747 KIF11P52732 1056 aa17.45■□□□□ 0.38
CDT1-202ENST00000562747 SLC7A9P82251 487 aa17.45■□□□□ 0.38
CDT1-202ENST00000562747 BST2Q10589 180 aaKnown RBP17.45■□□□□ 0.38
CDT1-202ENST00000562747 SIM2Q14190 667 aaPredicted RBP17.45■□□□□ 0.38
CDT1-202ENST00000562747 HEATR6Q6AI08 1181 aaKnown RBP17.45■□□□□ 0.38
CDT1-202ENST00000562747 TTC30AQ86WT1 665 aa17.45■□□□□ 0.38
CDT1-202ENST00000562747 CSGALNACT1Q8TDX6 532 aa17.45■□□□□ 0.38
CDT1-202ENST00000562747 TLR8Q9NR97 1041 aaKnown RBP17.45■□□□□ 0.38
CDT1-202ENST00000562747 FANCLQ9NW38 375 aa17.45■□□□□ 0.38
CDT1-202ENST00000562747 GTSE1Q9NYZ3 720 aa17.45■□□□□ 0.38
CDT1-202ENST00000562747 GMIPQ9P107 970 aa17.45■□□□□ 0.38
CDT1-202ENST00000562747 CHORDC1Q9UHD1 332 aaPredicted RBP17.45■□□□□ 0.38
CDT1-202ENST00000562747 USP3Q9Y6I4 520 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms