RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 PHKA2P46019 1235 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 GMPSP49915 693 aaPredicted RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 ZNF143P52747 638 aaPredicted RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 EIF3EP60228 445 aaKnown RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 SARNPP82979 210 aaKnown RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 ZNF200P98182 395 aaPredicted RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 TFAMQ00059 246 aaKnown RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 CDC42EP1Q00587 391 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 OTUD4Q01804 1114 aaKnown RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 ROR1Q01973 937 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 SP2Q02086 613 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 SLC25A11Q02978 314 aaKnown RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 DNAJC3Q13217 504 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 DPYSL3Q14195 570 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 KRT72Q14CN4 511 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 ZKSCAN8Q15776 578 aaPredicted RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 TBCCQ15814 346 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 PKN2Q16513 984 aaKnown RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 WDR72Q3MJ13 1102 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 ZNF484Q5JVG2 852 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 TMEM63BQ5T3F8 832 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 ATF7IP2Q5U623 682 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 FAM91A1Q658Y4 838 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 ATG16L1Q676U5 607 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 TLDC1Q6P9B6 456 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 CYS1Q717R9 158 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 BZW1Q7L1Q6 419 aaKnown RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 PHLDB2Q86SQ0 1253 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 RFX6Q8HWS3 928 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 ZNF784Q8NCA9 323 aaPredicted RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 MCUQ8NE86 351 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 ACTL9Q8TC94 416 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 NANOS1Q8WY41 292 aaKnown RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 CPT1BQ92523 772 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 N4BP2L2Q92802 583 aaPredicted RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 RTP4Q96DX8 246 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 TMEM176AQ96HP8 235 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 INSM2Q96T92 566 aaPredicted RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 FERMT1Q9BQL6 677 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 SYT17Q9BSW7 474 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 CNPY3Q9BT09 278 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 TMEM121Q9BTD3 319 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 MTMR12Q9C0I1 747 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 HAPLN2Q9GZV7 340 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 IQCGQ9H095 443 aaKnown RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 XYLT2Q9H1B5 865 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 MMADHCQ9H3L0 296 aaPredicted RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 FAM96AQ9H5X1 160 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 TLE6Q9H808 572 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 MANSC1Q9H8J5 431 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 PTPRHQ9HD43 1115 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 MKS1Q9NXB0 559 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 ZFP69BQ9UJL9 534 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 ITGA11Q9UKX5 1188 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 AGAP1Q9UPQ3 857 aa7.81□□□□□ -1.16
CFDP1-202ENST00000562602 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.81□□□□□ -1.16
CFDP1-202ENST00000562602 CEP350Q5VT06 3117 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 ERVH48-1M5A8F1 160 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 PRPSAP2O60256 369 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 KRT38O76015 456 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 ENDOD1O94919 500 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 GH1P01241 217 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 HOXC6P09630 235 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 RBP3P10745 1247 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 HARSP12081 509 aaKnown RBP7.8□□□□□ -1.16
CFDP1-202ENST00000562602 GPD1P21695 349 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 CALB2P22676 271 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 MARK3P27448 753 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 RPA3P35244 121 aaPredicted RBP7.8□□□□□ -1.16
CFDP1-202ENST00000562602 RFC1P35251 1148 aaPredicted RBP7.8□□□□□ -1.16
CFDP1-202ENST00000562602 RPL22P35268 128 aaKnown RBP7.8□□□□□ -1.16
CFDP1-202ENST00000562602 TCF7P36402 384 aaPredicted RBP7.8□□□□□ -1.16
CFDP1-202ENST00000562602 SCNN1AP37088 669 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 NR2C2P49116 596 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 SERPINB9P50453 376 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 CLNS1AP54105 237 aaKnown RBP7.8□□□□□ -1.16
CFDP1-202ENST00000562602 KCNJ2P63252 427 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 RBP5P82980 135 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 RELBQ01201 579 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 CNTN2Q02246 1040 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 SLC18A2Q05940 514 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 PTPN11Q06124 597 aaPredicted RBP7.8□□□□□ -1.16
CFDP1-202ENST00000562602 ZNF252P-AS1Q0IIN9 211 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 NOMO1Q15155 1222 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 LLGL1Q15334 1064 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 CELF3Q5SZQ8 465 aaKnown RBP7.8□□□□□ -1.16
CFDP1-202ENST00000562602 STXBP5Q5T5C0 1151 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 UBAP2Q5T6F2 1119 aaKnown RBP7.8□□□□□ -1.16
CFDP1-202ENST00000562602 TTC39BQ5VTQ0 682 aaPredicted RBP7.8□□□□□ -1.16
CFDP1-202ENST00000562602 DENND1BQ6P3S1 775 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 DARS2Q6PI48 645 aaKnown RBP7.8□□□□□ -1.16
CFDP1-202ENST00000562602 LVRNQ6Q4G3 990 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 ARCQ7LC44 396 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 SLC26A11Q86WA9 606 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 XYLT1Q86Y38 959 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 RHPN2Q8IUC4 686 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 CCNJLQ8IV13 435 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 WDTC1Q8N5D0 677 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 BANPQ8N9N5 519 aa7.8□□□□□ -1.16
CFDP1-202ENST00000562602 RNF149Q8NC42 400 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms