RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 NDRG2Q9UN36 371 aaKnown RBP12.16□□□□□ -0.46
FANCA-209ENST00000562424 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.16□□□□□ -0.46
FANCA-209ENST00000562424 ZNF292O60281 2723 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 HHLA1C9JL84 531 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 SPECC1L-ADORA2AF8WAN1 911 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 SMAPO00193 183 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 ABL1P00519 1130 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 ZDHHC11BP0C7U3 371 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 SLC7A9P82251 487 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 ZXDBP98169 803 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 CETN1Q12798 172 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 LRMPQ12912 555 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 RUNX3Q13761 415 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 PDGFRLQ15198 375 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 ARHGAP17Q68EM7 881 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 TRIM68Q6AZZ1 485 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 GPRIN1Q7Z2K8 1008 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 C1orf210Q8IVY1 113 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 PARP9Q8IXQ6 854 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 UBR7Q8N806 425 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 TTC8Q8TAM2 541 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 LMO3Q8TAP4 145 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 NT5C1BQ96P26 610 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 DUSP16Q9BY84 665 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 EBF3Q9H4W6 596 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 GMIPQ9P107 970 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 CHORDC1Q9UHD1 332 aaPredicted RBP12.15□□□□□ -0.46
FANCA-209ENST00000562424 DCHS1Q96JQ0 3298 aa12.15□□□□□ -0.46
FANCA-209ENST00000562424 EP300Q09472 2414 aaPredicted RBP12.15□□□□□ -0.47
FANCA-209ENST00000562424 AFPP02771 609 aaKnown RBP12.14□□□□□ -0.47
FANCA-209ENST00000562424 ARSAP15289 507 aa12.14□□□□□ -0.47
FANCA-209ENST00000562424 CLCN1P35523 988 aa12.14□□□□□ -0.47
FANCA-209ENST00000562424 TUBP50607 506 aa12.14□□□□□ -0.47
FANCA-209ENST00000562424 DPCR1Q3MIW9 517 aa12.14□□□□□ -0.47
FANCA-209ENST00000562424 HECTD3Q5T447 861 aa12.14□□□□□ -0.47
FANCA-209ENST00000562424 TXNDC11Q6PKC3 985 aa12.14□□□□□ -0.47
FANCA-209ENST00000562424 KIAA1958Q8N8K9 716 aa12.14□□□□□ -0.47
FANCA-209ENST00000562424 OSCP1Q8WVF1 389 aa12.14□□□□□ -0.47
FANCA-209ENST00000562424 CNOT6LQ96LI5 555 aaKnown RBP12.14□□□□□ -0.47
FANCA-209ENST00000562424 CHRDQ9H2X0 955 aa12.14□□□□□ -0.47
FANCA-209ENST00000562424 KDM4CQ9H3R0 1056 aa12.14□□□□□ -0.47
FANCA-209ENST00000562424 TLR8Q9NR97 1041 aaKnown RBP12.14□□□□□ -0.47
FANCA-209ENST00000562424 DUS2Q9NX74 493 aaKnown RBP12.14□□□□□ -0.47
FANCA-209ENST00000562424 SCML2Q9UQR0 700 aa12.14□□□□□ -0.47
FANCA-209ENST00000562424 CPQQ9Y646 472 aa12.14□□□□□ -0.47
FANCA-209ENST00000562424 CACNA1AO00555 2505 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 RCCD1A6NED2 376 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 OTOL1A6NHN0 477 aaPredicted RBP12.13□□□□□ -0.47
FANCA-209ENST00000562424 LEFTY2O00292 366 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 COCHO43405 550 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 MBL2P11226 248 aaPredicted RBP12.13□□□□□ -0.47
FANCA-209ENST00000562424 CHRNB1P11230 501 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 ACO1P21399 889 aaKnown RBP12.13□□□□□ -0.47
FANCA-209ENST00000562424 ID4P47928 161 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 IFNAR2P48551 515 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 KIF11P52732 1056 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 SGO2Q562F6 1265 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 DDX42Q86XP3 938 aaKnown RBP eCLIP12.13□□□□□ -0.47
FANCA-209ENST00000562424 IRF2BP1Q8IU81 584 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 PPM1KQ8N3J5 372 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 CPA6Q8N4T0 437 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 ANKRD52Q8NB46 1076 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 EHBP1Q8NDI1 1231 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 TTC16Q8NEE8 873 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 GPT2Q8TD30 523 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 ATP2A3Q93084 1043 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 JAKMIP2Q96AA8 810 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 IER2Q9BTL4 223 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 UBXN6Q9BZV1 441 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 CCSER2Q9H7U1 834 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 LMAN1LQ9HAT1 526 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 SPATA6Q9NWH7 488 aaPredicted RBP12.13□□□□□ -0.47
FANCA-209ENST00000562424 SMPD4Q9NXE4 827 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 WNT6Q9Y6F9 365 aa12.13□□□□□ -0.47
FANCA-209ENST00000562424 GOLGA6L22H0YM25 854 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 CYP26A1O43174 497 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 LAMTOR5O43504 91 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 TLR5O60602 858 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 PAEPP09466 180 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 VDRP11473 427 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 ERCC5P28715 1186 aaPredicted RBP12.12□□□□□ -0.47
FANCA-209ENST00000562424 PGFP49763 221 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 GCNT1Q02742 428 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 PON2Q15165 354 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 EML3Q32P44 896 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 ADGRD1Q6QNK2 874 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 TMEM270Q6UE05 265 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 TTC30AQ86WT1 665 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 ARHGEF19Q8IW93 802 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 MAML2Q8IZL2 1156 aaPredicted RBP12.12□□□□□ -0.47
FANCA-209ENST00000562424 KAT5Q92993 513 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 CHFRQ96EP1 664 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 ZFRQ96KR1 1074 aaKnown RBP12.12□□□□□ -0.47
FANCA-209ENST00000562424 INTS2Q9H0H0 1204 aaKnown RBP12.12□□□□□ -0.47
FANCA-209ENST00000562424 LINC00597Q9H2U6 94 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 THAP9Q9H5L6 903 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 ECT2Q9H8V3 914 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 CYLDQ9NQC7 956 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 DACH1Q9UI36 760 aa12.12□□□□□ -0.47
FANCA-209ENST00000562424 TSPAN16Q9UKR8 245 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms