RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ZBED1O96006 694 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 GDI1P31150 447 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 NR1I3Q14994 352 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 ARHGAP29Q52LW3 1261 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 SCD5Q86SK9 330 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 SIX6OS1Q8N1H7 587 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 ZNF276Q8N554 614 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 RIN3Q8TB24 985 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 STK32AQ8WU08 396 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 IRF7Q92985 503 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 SPAG5Q96R06 1193 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 CCSER2Q9H7U1 834 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 BRD9Q9H8M2 597 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 NMUR1Q9HB89 426 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 NLRC4Q9NPP4 1024 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 TRPV5Q9NQA5 729 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 CNGB3Q9NQW8 809 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.58■□□□□ 0.4
CLK3-207ENST00000562389 OSER1Q9NX31 292 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 CLIC5Q9NZA1 410 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 FBXL21Q9UKT6 434 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 ARNTLO00327 626 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 GABBR2O75899 941 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 MBL2P11226 248 aaPredicted RBP17.57■□□□□ 0.4
CLK3-207ENST00000562389 CYP11B1P15538 503 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 SOX5P35711 763 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 ACADSBP45954 432 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 RGS7P49802 495 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 PLCB2Q00722 1185 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 KLHDC10Q6PID8 442 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 BHLHA9Q7RTU4 235 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 DDX42Q86XP3 938 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLK3-207ENST00000562389 KIAA1958Q8N8K9 716 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 SH3RF2Q8TEC5 729 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 CDK5RAP1Q96SZ6 601 aaKnown RBP17.57■□□□□ 0.4
CLK3-207ENST00000562389 LHX5Q9H2C1 402 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 THG1LQ9NWX6 298 aaKnown RBP17.57■□□□□ 0.4
CLK3-207ENST00000562389 NAGPAQ9UK23 515 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 CPQQ9Y646 472 aa17.57■□□□□ 0.4
CLK3-207ENST00000562389 FAM86C2PA6NEL3 165 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 PRR33A8MZF0 331 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 LEFTY2O00292 366 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 FBXO21O94952 628 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 RALAP11233 206 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 RARGP13631 454 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 LCP1P13796 627 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 KRT9P35527 623 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 STAT1P42224 750 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 DAOAP59103 153 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 YWHAGP61981 247 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLK3-207ENST00000562389 ZXDBP98169 803 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 MTF1Q14872 753 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 TMEM31Q5JXX7 168 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 BMP8AQ7Z5Y6 402 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 TADA2BQ86TJ2 420 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 EPS8L1Q8TE68 723 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 IRGQQ8WZA9 623 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 ZFRQ96KR1 1074 aaKnown RBP17.56■□□□□ 0.4
CLK3-207ENST00000562389 SLC4A5Q9BY07 1137 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 ARHGEF3Q9NR81 526 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 CYTH4Q9UIA0 394 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 CA14Q9ULX7 337 aa17.56■□□□□ 0.4
CLK3-207ENST00000562389 KRBA1A5PL33 1030 aa17.55■□□□□ 0.4
CLK3-207ENST00000562389 GFPT2O94808 682 aa17.55■□□□□ 0.4
CLK3-207ENST00000562389 ATP5C1P36542 298 aaKnown RBP17.55■□□□□ 0.4
CLK3-207ENST00000562389 UBASH3AP57075 661 aa17.55■□□□□ 0.4
CLK3-207ENST00000562389 PDCLQ13371 301 aa17.55■□□□□ 0.4
CLK3-207ENST00000562389 CACNA2D4Q7Z3S7 1137 aa17.55■□□□□ 0.4
CLK3-207ENST00000562389 NOP9Q86U38 636 aaKnown RBP17.55■□□□□ 0.4
CLK3-207ENST00000562389 ZNF677Q86XU0 584 aa17.55■□□□□ 0.4
CLK3-207ENST00000562389 PASD1Q8IV76 773 aa17.55■□□□□ 0.4
CLK3-207ENST00000562389 SIX5Q8N196 739 aa17.55■□□□□ 0.4
CLK3-207ENST00000562389 DDX1Q92499 740 aaKnown RBP17.55■□□□□ 0.4
CLK3-207ENST00000562389 FAM83CQ9BQN1 747 aa17.55■□□□□ 0.4
CLK3-207ENST00000562389 NACA2Q9H009 215 aa17.55■□□□□ 0.4
CLK3-207ENST00000562389 ST7Q9NRC1 585 aa17.55■□□□□ 0.4
CLK3-207ENST00000562389 SMPD4Q9NXE4 827 aa17.55■□□□□ 0.4
CLK3-207ENST00000562389 CEP83Q9Y592 693 aa17.55■□□□□ 0.4
CLK3-207ENST00000562389 YJEFN3A6XGL0 299 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 E7ENQ6 273 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 PIK3R2O00459 728 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 TBX18O95935 607 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 CDH5P33151 784 aaPredicted RBP17.54■□□□□ 0.4
CLK3-207ENST00000562389 PBX1P40424 430 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 PRKCQQ04759 706 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 MLF2Q15773 248 aaPredicted RBP17.54■□□□□ 0.4
CLK3-207ENST00000562389 SLC44A4Q53GD3 710 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 C10orf120Q5SQS8 335 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 CC2D1AQ6P1N0 951 aaPredicted RBP17.54■□□□□ 0.4
CLK3-207ENST00000562389 TMEM110Q86TL2 294 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 WDTC1Q8N5D0 677 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 C1orf131Q8NDD1 294 aaKnown RBP17.54■□□□□ 0.4
CLK3-207ENST00000562389 OSCP1Q8WVF1 389 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 NDRG1Q92597 394 aaKnown RBP17.54■□□□□ 0.4
CLK3-207ENST00000562389 ZFYVE19Q96K21 471 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 NOX5Q96PH1 765 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 DNMT3LQ9UJW3 386 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 NOCTQ9UK39 431 aaKnown RBP17.54■□□□□ 0.4
CLK3-207ENST00000562389 MYO6Q9UM54 1294 aa17.54■□□□□ 0.4
CLK3-207ENST00000562389 E5RJQ4 531 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms