RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 TMEM161AQ9NX61 479 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 NFS1Q9Y697 457 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 COL4A4P53420 1690 aaPredicted RBP17.3■□□□□ 0.36
PKD1-225ENST00000562297 HHLA1C9JL84 531 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 MDM4O15151 490 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 ITGAVP06756 1048 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 COL6A1P12109 1028 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 MATKP42679 507 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 RABGGTBP53611 331 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 DYNLT1P63172 113 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 MMRN1Q13201 1228 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 ZC3H12AQ5D1E8 599 aaKnown RBP17.3■□□□□ 0.36
PKD1-225ENST00000562297 OTUD1Q5VV17 481 aaPredicted RBP17.3■□□□□ 0.36
PKD1-225ENST00000562297 GPRIN1Q7Z2K8 1008 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 ALLCQ8N6M5 410 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 GLIS1Q8NBF1 620 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 ACTL9Q8TC94 416 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 NT5C3BQ969T7 300 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 MYLPFQ96A32 169 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 SNRNP25Q9BV90 132 aaKnown RBP17.3■□□□□ 0.36
PKD1-225ENST00000562297 CALN1Q9BXU9 219 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 RHOBTB2Q9BYZ6 727 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 EPB41L4BQ9H329 900 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 CSNK1G1Q9HCP0 422 aa17.3■□□□□ 0.36
PKD1-225ENST00000562297 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.3■□□□□ 0.36
PKD1-225ENST00000562297 TMEM189-UBE2V1I3L0A0 370 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 ENPP3O14638 875 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 RNF40O75150 1001 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 CCL5P13501 91 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 ITIH2P19823 946 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 TYMPP19971 482 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 TKTL1P51854 596 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 ATXN1P54253 815 aaKnown RBP17.29■□□□□ 0.36
PKD1-225ENST00000562297 OTUD4Q01804 1114 aaKnown RBP17.29■□□□□ 0.36
PKD1-225ENST00000562297 LMNB2Q03252 620 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 CA9Q16790 459 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 TCTN1Q2MV58 587 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 SCYL2Q6P3W7 929 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 BNIPLQ7Z465 357 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 PRUNE1Q86TP1 453 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 METTL23Q86XA0 190 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 DEFB106AQ8N104 65 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 SMARCD1Q96GM5 515 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 LRRC4Q9HBW1 653 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 TMLHEQ9NVH6 421 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 GPATCH2LQ9NWQ4 482 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 PLAAQ9Y263 795 aa17.29■□□□□ 0.36
PKD1-225ENST00000562297 NRP1O14786 923 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 DAB1O75553 588 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 KRT14P02533 472 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 PECAM1P16284 738 aaPredicted RBP17.28■□□□□ 0.36
PKD1-225ENST00000562297 YWHAZP63104 245 aaKnown RBP17.28■□□□□ 0.36
PKD1-225ENST00000562297 MTMR3Q13615 1198 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 PDK2Q15119 407 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 SLC25A52Q3SY17 297 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 SPDYCQ5MJ68 293 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 OVOS1Q6IE37 1185 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 ZNF365Q70YC5 407 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 STRADAQ7RTN6 431 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 LRRTM3Q86VH5 581 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 VSIG1Q86XK7 387 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 CCDC89Q8N998 374 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 TTC13Q8NBP0 860 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 SLC2A13Q96QE2 648 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 TMEM209Q96SK2 561 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 FRMD8P1Q9BZ68 369 aaPredicted RBP17.28■□□□□ 0.36
PKD1-225ENST00000562297 RNF208Q9H0X6 261 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 ELAC1Q9H777 363 aaKnown RBP17.28■□□□□ 0.36
PKD1-225ENST00000562297 PCDH18Q9HCL0 1135 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 AAASQ9NRG9 546 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 ZNF148Q9UQR1 794 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 ATP8A1Q9Y2Q0 1164 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 FNDC1Q4ZHG4 1894 aaPredicted RBP17.28■□□□□ 0.36
PKD1-225ENST00000562297 APOC4-APOC2K7ER74 178 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 APOC2P02655 101 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 FYNP06241 537 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 ATF2P15336 505 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 MNX1P50219 401 aaPredicted RBP17.28■□□□□ 0.36
PKD1-225ENST00000562297 CALCOCO2Q13137 446 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 RFX6Q8HWS3 928 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 SIX6OS1Q8N1H7 587 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 CRIPAKQ8N1N5 446 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 URGCPQ8TCY9 931 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 RNF157Q96PX1 679 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 ULBP1Q9BZM6 244 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.28■□□□□ 0.36
PKD1-225ENST00000562297 KANSL3Q9P2N6 904 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 DNAJB4Q9UDY4 337 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 MTRF1LQ9UGC7 380 aaKnown RBP17.28■□□□□ 0.36
PKD1-225ENST00000562297 PCDHB8Q9UN66 801 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 MICAL3Q7RTP6 2002 aa17.28■□□□□ 0.36
PKD1-225ENST00000562297 PQBP1O60828 265 aaKnown RBP17.27■□□□□ 0.36
PKD1-225ENST00000562297 FBXO21O94952 628 aa17.27■□□□□ 0.36
PKD1-225ENST00000562297 DESP17661 470 aa17.27■□□□□ 0.36
PKD1-225ENST00000562297 ADCY8P40145 1251 aa17.27■□□□□ 0.36
PKD1-225ENST00000562297 VPS41P49754 854 aa17.27■□□□□ 0.36
PKD1-225ENST00000562297 DAOAP59103 153 aa17.27■□□□□ 0.36
PKD1-225ENST00000562297 PITX1P78337 314 aaPredicted RBP17.27■□□□□ 0.36
PKD1-225ENST00000562297 LRIG3Q6UXM1 1119 aa17.27■□□□□ 0.36
PKD1-225ENST00000562297 HFE2Q6ZVN8 426 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms