RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 USP28Q96RU2 1077 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 B3GNT5Q9BYG0 378 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 TRIM9Q9C026 710 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 LRRC27Q9C0I9 530 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 AGPAT3Q9NRZ7 376 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 DEC1Q9P2X7 70 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 SH3BP1Q9Y3L3 701 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 CKAP5Q14008 2032 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 TP53BP1Q12888 1972 aaPredicted RBP10.9□□□□□ -0.66
BBS4-205ENST00000562219 ADAMTS20P59510 1910 aa10.9□□□□□ -0.67
BBS4-205ENST00000562219 FREM2Q5SZK8 3169 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 NBEAQ8NFP9 2946 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 ANKRD11Q6UB99 2663 aaPredicted RBP10.89□□□□□ -0.67
BBS4-205ENST00000562219 SRRM3A6NNA2 597 aaPredicted RBP10.89□□□□□ -0.67
BBS4-205ENST00000562219 TGFB1I1O43294 461 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 HYAL3O43820 417 aaPredicted RBP10.89□□□□□ -0.67
BBS4-205ENST00000562219 HOXB2P14652 356 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 GABRG2P18507 467 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 SYT1P21579 422 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 CYP2J2P51589 502 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 SLC5A3P53794 718 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 ATXN3P54252 364 aaPredicted RBP10.89□□□□□ -0.67
BBS4-205ENST00000562219 ASIC1P78348 528 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 SIM1P81133 766 aaPredicted RBP10.89□□□□□ -0.67
BBS4-205ENST00000562219 RPL6Q02878 288 aaKnown RBP10.89□□□□□ -0.67
BBS4-205ENST00000562219 GFPT1Q06210 699 aaPredicted RBP10.89□□□□□ -0.67
BBS4-205ENST00000562219 TRPC3Q13507 836 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 E2F4Q16254 413 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 DUOXA1Q1HG43 343 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 ANO4Q32M45 955 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 FAM26FQ5R3K3 315 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 C10orf76Q5T2E6 689 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 SLC36A4Q6YBV0 504 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 NUDT18Q6ZVK8 323 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 FAM35AQ86V20 835 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 BBS7Q8IWZ6 715 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 HDDC3Q8N4P3 179 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 NAT16Q8N8M0 369 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 TERB1Q8NA31 727 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 XXYLT1Q8NBI6 393 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 RDH13Q8NBN7 331 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 ZNF507Q8TCN5 953 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 SYAP1Q96A49 352 aaPredicted RBP10.89□□□□□ -0.67
BBS4-205ENST00000562219 SMARCD1Q96GM5 515 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 KCNK16Q96T55 309 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 XYLT2Q9H1B5 865 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 CUEDC2Q9H467 287 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 CCSER2Q9H7U1 834 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 CAPN10Q9HC96 672 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 DMAP1Q9NPF5 467 aaPredicted RBP10.89□□□□□ -0.67
BBS4-205ENST00000562219 SPHK2Q9NRA0 654 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 KBTBD4Q9NVX7 518 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 CALCOCO1Q9P1Z2 691 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 NXF1Q9UBU9 619 aaKnown RBP10.89□□□□□ -0.67
BBS4-205ENST00000562219 SLC6A14Q9UN76 642 aa10.89□□□□□ -0.67
BBS4-205ENST00000562219 PLXNB3Q9ULL4 1909 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 SPAARA0A1B0GVQ0 90 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 FAM92AA1XBS5 289 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 SERPINF2P08697 491 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 ZDHHC11BP0C7U3 371 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 NTSR1P30989 418 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 ATICP31939 592 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 MYL6P60660 151 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 SNRPFP62306 86 aaKnown RBP10.88□□□□□ -0.67
BBS4-205ENST00000562219 AMPD3Q01432 767 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 CNNM4Q6P4Q7 775 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 MINDY1Q8N5J2 469 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 SCAMP5Q8TAC9 235 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 TMEM131Q92545 1883 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 TNIP3Q96KP6 325 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 MED10Q9BTT4 135 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 GTPBP2Q9BX10 602 aaKnown RBP10.88□□□□□ -0.67
BBS4-205ENST00000562219 NACA2Q9H009 215 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 GZF1Q9H116 711 aaPredicted RBP10.88□□□□□ -0.67
BBS4-205ENST00000562219 SMYD3Q9H7B4 428 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 FSCN3Q9NQT6 498 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 KRT82Q9NSB4 513 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 COMMD8Q9NX08 183 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 IL37Q9NZH6 218 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 GMIPQ9P107 970 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 CHORDC1Q9UHD1 332 aaPredicted RBP10.88□□□□□ -0.67
BBS4-205ENST00000562219 KLK13Q9UKR3 277 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 MSRB2Q9Y3D2 182 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 STARD13Q9Y3M8 1113 aa10.88□□□□□ -0.67
BBS4-205ENST00000562219 A0A1W2PQF6 199 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 H0Y626 953 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 CLIC2O15247 247 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 ZBTB24O43167 697 aaPredicted RBP10.87□□□□□ -0.67
BBS4-205ENST00000562219 CACNG3O60359 315 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 OPHN1O60890 802 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 PHACTR2O75167 634 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 ZNF217O75362 1048 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 CLSTN1O94985 981 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 TRIM16O95361 564 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 IRF1P10914 325 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 RDXP35241 583 aaKnown RBP10.87□□□□□ -0.67
BBS4-205ENST00000562219 NASPP49321 788 aaPredicted RBP10.87□□□□□ -0.67
BBS4-205ENST00000562219 ZNF33AQ06730 810 aa10.87□□□□□ -0.67
BBS4-205ENST00000562219 COL9A2Q14055 689 aaPredicted RBP10.87□□□□□ -0.67
BBS4-205ENST00000562219 STK38Q15208 465 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms