RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	ZNF518B	Q9C0D4	1074 aa		4.7	□□□□□ -1.66
LRRC28-222	ENST00000561431	TTYH3	Q9C0H2	523 aa		4.7	□□□□□ -1.66
LRRC28-222	ENST00000561431	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.7	□□□□□ -1.66
LRRC28-222	ENST00000561431	PARPBP	Q9NWS1	579 aa		4.7	□□□□□ -1.66
LRRC28-222	ENST00000561431	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.7	□□□□□ -1.66
LRRC28-222	ENST00000561431	DMTF1	Q9Y222	760 aa		4.7	□□□□□ -1.66
LRRC28-222	ENST00000561431	KNSTRN	Q9Y448	316 aa		4.7	□□□□□ -1.66
LRRC28-222	ENST00000561431	PAXBP1	Q9Y5B6	917 aa		4.7	□□□□□ -1.66
LRRC28-222	ENST00000561431	ADAMTS7	Q9UKP4	1686 aa		4.7	□□□□□ -1.66
LRRC28-222	ENST00000561431	COL24A1	Q17RW2	1714 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	CIC	Q96RK0	1608 aa	Predicted RBP	4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	CCDC195	A0A1B0GUA6	201 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	PRRT4	C9JH25	899 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	RNASET2	O00584	256 aa	Known RBP	4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	TRIM24	O15164	1050 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	ZNF185	O15231	689 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	IL18RAP	O95256	599 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	ABHD16A	O95870	558 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	PIM1	P11309	404 aa	Predicted RBP	4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	XRCC6	P12956	609 aa	Known RBP eCLIP	4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	CHRM3	P20309	590 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	FGFR4	P22455	802 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	ACRV1	P26436	265 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	SLC11A2	P49281	568 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	ARFIP2	P53365	341 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	RPS16	P62249	146 aa	Known RBP	4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	FPGS	Q05932	587 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	ALDH1L2	Q3SY69	923 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	PDCD4	Q53EL6	469 aa	Known RBP	4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	RABL3	Q5HYI8	236 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	C1QL3	Q5VWW1	255 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	NAIF1	Q69YI7	327 aa	Predicted RBP	4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	SKAP1	Q86WV1	359 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	C1orf210	Q8IVY1	113 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	MAPKAPK5	Q8IW41	473 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	LSM14A	Q8ND56	463 aa	Known RBP	4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	GJA10	Q969M2	543 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	ERP27	Q96DN0	273 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	RNF31	Q96EP0	1072 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	RIPOR3	Q96MK2	946 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	WWC2-AS2	Q96NR7	200 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	MED15	Q96RN5	788 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	CERS4	Q9HA82	394 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	AS3MT	Q9HBK9	375 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	ARFGAP3	Q9NP61	516 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	A1CF	Q9NQ94	594 aa	Known RBP	4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	SERHL	Q9NQF3	203 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	STK32B	Q9NY57	414 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	CLIC5	Q9NZA1	410 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	C11orf21	Q9P2W6	132 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	XPR1	Q9UBH6	696 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	ASAP1	Q9ULH1	1129 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	AGAP1	Q9UPQ3	857 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	RAD54B	Q9Y620	910 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	FPGT-TNNI3K	V9GXZ4	949 aa		4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	KDM6A	O15550	1401 aa	Predicted RBP	4.69	□□□□□ -1.66
LRRC28-222	ENST00000561431	ZNF831	Q5JPB2	1677 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	TAF1L	Q8IZX4	1826 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	KRTAP23-1	A1A580	65 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	TRIM43B	A6NCK2	446 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	RASA4B	C9J798	803 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	PYCARD-AS1	I3L0S3	204 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	RASA4	O43374	803 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	RNASEH2A	O75792	299 aa	Known RBP	4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	DNAJB5	O75953	348 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	NDUFA10	O95299	355 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	ITGAL	P20701	1170 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	TNFSF4	P23510	183 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	MTHFS	P49914	203 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	TERF1	P54274	439 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	KRT17	Q04695	432 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	SLFN5	Q08AF3	891 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	ZNF543	Q08ER8	600 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	DAG1	Q14118	895 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	IQCB1	Q15051	598 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	GRAMD1B	Q3KR37	738 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	USP39	Q53GS9	565 aa	Known RBP	4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	ALF	Q53S48	1182 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	FAM209B	Q5JX69	171 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	CC2D1B	Q5T0F9	858 aa	Known RBP	4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	TTLL5	Q6EMB2	1281 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	RNF44	Q7L0R7	432 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	CLNK	Q7Z7G1	428 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	SESTD1	Q86VW0	696 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	IQCD	Q96DY2	449 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	ANP32E	Q9BTT0	268 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	STARD7	Q9NQZ5	370 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	TBC1D23	Q9NUY8	699 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	MAP3K2	Q9Y2U5	619 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	C4B	P0C0L5	1744 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	MRC1	P22897	1456 aa		4.68	□□□□□ -1.66
LRRC28-222	ENST00000561431	PALLD	Q8WX93	1383 aa		4.67	□□□□□ -1.66
LRRC28-222	ENST00000561431	COL5A3	P25940	1745 aa	Predicted RBP	4.67	□□□□□ -1.66
LRRC28-222	ENST00000561431	TJP1	Q07157	1748 aa		4.67	□□□□□ -1.66
LRRC28-222	ENST00000561431	TMEM233	B4DJY2	109 aa		4.67	□□□□□ -1.66
LRRC28-222	ENST00000561431		E9PLN8	166 aa		4.67	□□□□□ -1.66

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