RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 ORC3Q9UBD5 711 aaPredicted RBP6.75□□□□□ -1.33
LRRC28-220ENST00000561253 SEC63Q9UGP8 760 aaKnown RBP6.75□□□□□ -1.33
LRRC28-220ENST00000561253 ZNFX1Q9P2E3 1918 aaKnown RBP6.74□□□□□ -1.33
LRRC28-220ENST00000561253 TNRC18O15417 2968 aaPredicted RBP6.74□□□□□ -1.33
LRRC28-220ENST00000561253 LRRC37A2A6NM11 1700 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 A0A1W2PR48 441 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 GCOM1H8Y6P7 765 aaPredicted RBP6.74□□□□□ -1.33
LRRC28-220ENST00000561253 CPLX1O14810 134 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 ADCY6O43306 1168 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 PRAMEF4O60810 478 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 CDKL5O76039 1030 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 POLR2MP0CAP2 368 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 GAAP10253 952 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 CALML3P27482 149 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 CYP2C19P33261 490 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 ALDH5A1P51649 535 aaPredicted RBP6.74□□□□□ -1.33
LRRC28-220ENST00000561253 ARHGEF6Q15052 776 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 UBE2SQ16763 222 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 UAP1L1Q3KQV9 507 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 EARS2Q5JPH6 523 aaKnown RBP6.74□□□□□ -1.33
LRRC28-220ENST00000561253 FAM102BQ5T8I3 360 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 NT5DC1Q5TFE4 455 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 WDR78Q5VTH9 848 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 TAPT1Q6NXT6 567 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 BORAQ6PGQ7 559 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 USP30Q70CQ3 517 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 CLEC14AQ86T13 490 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 ANKRD35Q8N283 1001 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 PLA2G15Q8NCC3 412 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 DNERQ8NFT8 737 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 RIN2Q8WYP3 895 aaPredicted RBP6.74□□□□□ -1.33
LRRC28-220ENST00000561253 PDCD2LQ9BRP1 358 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 PSTPIP2Q9H939 334 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 PXMP2Q9NR77 195 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 NRBP1Q9UHY1 535 aa6.74□□□□□ -1.33
LRRC28-220ENST00000561253 CTDP1Q9Y5B0 961 aaPredicted RBP6.74□□□□□ -1.33
LRRC28-220ENST00000561253 SMCO2A6NFE2 343 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 DBX1A6NMT0 343 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 B4GALT4O60513 344 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 LTA4HP09960 611 aaKnown RBP6.73□□□□□ -1.33
LRRC28-220ENST00000561253 CFPP27918 469 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 SREBF1P36956 1147 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 ADCY7P51828 1080 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 NAPAP54920 295 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 HMGN5P82970 282 aaKnown RBP6.73□□□□□ -1.33
LRRC28-220ENST00000561253 TMEM63BQ5T3F8 832 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 CXorf57Q6NSI4 855 aaKnown RBP6.73□□□□□ -1.33
LRRC28-220ENST00000561253 CPLX2Q6PUV4 134 aaKnown RBP6.73□□□□□ -1.33
LRRC28-220ENST00000561253 ARMCX2Q7L311 632 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 DPP9Q86TI2 863 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 TPH2Q8IWU9 490 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 PIK3C3Q8NEB9 887 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 FBXO18Q8NFZ0 1043 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 RAET1EQ8TD07 263 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 LENG9Q96B70 501 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 SLC7A6OSQ96CW6 309 aaPredicted RBP6.73□□□□□ -1.33
LRRC28-220ENST00000561253 INPP4AQ96PE3 977 aaPredicted RBP6.73□□□□□ -1.33
LRRC28-220ENST00000561253 RMDN3Q96TC7 470 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 RBM12Q9NTZ6 932 aaKnown RBP6.73□□□□□ -1.33
LRRC28-220ENST00000561253 SCOCQ9UIL1 159 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 KCNJ14Q9UNX9 436 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 MYH6P13533 1939 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 PDE4DIPQ5VU43 2346 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 MCM3APO60318 1980 aa6.73□□□□□ -1.33
LRRC28-220ENST00000561253 RBBP6Q7Z6E9 1792 aaKnown RBP6.72□□□□□ -1.33
LRRC28-220ENST00000561253 IGLV3-22A0A075B6J6 115 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 C2orf78A6NCI8 922 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 CTAGE5O15320 804 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 AKR1B10O60218 316 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 NOBOXO60393 691 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 TMEM127O75204 238 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 ARIH2O95376 493 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 MMP1P03956 469 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 CYP3A4P08684 503 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 CTSSP25774 331 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 CCND3P30281 292 aaPredicted RBP6.72□□□□□ -1.33
LRRC28-220ENST00000561253 CIITAP33076 1130 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 MRPL12P52815 198 aaKnown RBP6.72□□□□□ -1.33
LRRC28-220ENST00000561253 MLC1Q15049 377 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 PGM5Q15124 567 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 NOMO1Q15155 1222 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 PRAMEF19Q5SWL8 479 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 GJC2Q5T442 439 aaPredicted RBP6.72□□□□□ -1.33
LRRC28-220ENST00000561253 KRT40Q6A162 431 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 NXNQ6DKJ4 435 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 GALNT17Q6IS24 598 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 TAS1R1Q7RTX1 841 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 CCAR1Q8IX12 1150 aaKnown RBP6.72□□□□□ -1.33
LRRC28-220ENST00000561253 TCEAL8Q8IYN2 117 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 GPR156Q8NFN8 814 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 CCDC148Q8NFR7 591 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 OR14K1Q8NGZ2 314 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 NSUN6Q8TEA1 469 aaKnown RBP6.72□□□□□ -1.33
LRRC28-220ENST00000561253 SNX33Q8WV41 574 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 NRG4Q8WWG1 115 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 CUL5Q93034 780 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 MBOAT7Q96N66 472 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 IWS1Q96ST2 819 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 GLT8D2Q9H1C3 349 aa6.72□□□□□ -1.33
LRRC28-220ENST00000561253 DMRT3Q9NQL9 472 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms