RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 HEATR6Q6AI08 1181 aaKnown RBP13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 GJB7Q6PEY0 223 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 RHBDF2Q6PJF5 856 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 PIGZQ86VD9 579 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 SPEM1Q8N4L4 309 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 PDZD8Q8NEN9 1154 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 P2RY13Q9BPV8 354 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 KLF16Q9BXK1 252 aaPredicted RBP13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 SRRTQ9BXP5 876 aaKnown RBP13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 ZDHHC4Q9NPG8 344 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 ZSCAN32Q9NX65 697 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 ATG2BQ96BY7 2078 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 MYOFQ9NZM1 2061 aa13.36□□□□□ -0.27
CHRNA3-208ENST00000561128 O00370 1275 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 TRIM24O15164 1050 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 HNRNPLP14866 589 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 BRD2P25440 801 aaKnown RBP13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 CXCL12P48061 93 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 TUBP50607 506 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 CCR3P51677 355 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 MARSP56192 900 aaKnown RBP13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 KDSRQ06136 332 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 PDE4CQ08493 712 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 KCNH2Q12809 1159 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 PKDCCQ504Y2 493 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 DGKKQ5KSL6 1271 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 LY6G5CQ5SRR4 150 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 FOXR2Q6PJQ5 311 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 MAMSTRQ6ZN01 415 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 RRAGAQ7L523 313 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 PHTF2Q8N3S3 785 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 CCDC150Q8NCX0 1101 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 UBA3Q8TBC4 463 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 CD101Q93033 1021 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 HHIPQ96QV1 700 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 INTS2Q9H0H0 1204 aaKnown RBP13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 METTL14Q9HCE5 456 aaKnown RBP13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 PNPLA8Q9NP80 782 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 CYLDQ9NQC7 956 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 LMBRD1Q9NUN5 540 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 EHD2Q9NZN4 543 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 TSPAN16Q9UKR8 245 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 SMG5Q9UPR3 1016 aaKnown RBP13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 PCDHGA2Q9Y5H1 932 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 USP3Q9Y6I4 520 aa13.35□□□□□ -0.27
CHRNA3-208ENST00000561128 K7EQS6 105 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 HRO43593 1189 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 PAPSS2O95340 614 aaPredicted RBP13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 NFATC1O95644 943 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 LMNAP02545 664 aaKnown RBP13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 RARGP13631 454 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 ZNF132P52740 706 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 SEC13P55735 322 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 RAB41Q5JT25 222 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 CCDC186Q7Z3E2 898 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 ADGRG2Q8IZP9 1017 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 PPM1KQ8N3J5 372 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 TRIML1Q8N9V2 468 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 RPLP0P6Q8NHW5 317 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 FAXDC2Q96IV6 333 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 CNOT6LQ96LI5 555 aaKnown RBP13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 ULBP1Q9BZM6 244 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 EPC1Q9H2F5 836 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 ACP6Q9NPH0 428 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 COMMD8Q9NX08 183 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 HCN2Q9UL51 889 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 OTOGLQ3ZCN5 2332 aa13.34□□□□□ -0.27
CHRNA3-208ENST00000561128 E2F8A0AVK6 867 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 BICDL2A1A5D9 508 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 PIK3R2O00459 728 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 PMM2O15305 246 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 KLKB1P03952 638 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 ADH5P11766 374 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 CD19P15391 556 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 ANP32AP39687 249 aaKnown RBP13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 PPP1R2P41236 205 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 PDE6CP51160 858 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 GRSF1Q12849 480 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 EMC10Q5UCC4 262 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 C1orf228Q6PIY5 440 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 TMEM270Q6UE05 265 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 Q6ZNB5 142 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 TMEM25Q86YD3 366 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 ETFBKMTQ8IXQ9 262 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 ANKRD52Q8NB46 1076 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 RBBP8NLQ8NC74 664 aaPredicted RBP13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 GPT2Q8TD30 523 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 NT5C1BQ96P26 610 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 CRACR2AQ9BSW2 395 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 IER2Q9BTL4 223 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 GTPBP4Q9BZE4 634 aaKnown RBP13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 FBXO44Q9H4M3 255 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 TLR8Q9NR97 1041 aaKnown RBP13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 RWDD2AQ9UIY3 292 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 NAGPAQ9UK23 515 aa13.33□□□□□ -0.28
CHRNA3-208ENST00000561128 GVINP1Q7Z2Y8 2422 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 STC2O76061 302 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 AFPP02771 609 aaKnown RBP13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 RGS7P49802 495 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms