RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 NUP58Q9BVL2 599 aa10.21□□□□□ -0.77
HERC1-210ENST00000560897 AGXT2Q9BYV1 514 aa10.21□□□□□ -0.77
HERC1-210ENST00000560897 C17orf75Q9HAS0 396 aa10.21□□□□□ -0.77
HERC1-210ENST00000560897 TMLHEQ9NVH6 421 aa10.21□□□□□ -0.77
HERC1-210ENST00000560897 DNAJC17Q9NVM6 304 aaKnown RBP10.21□□□□□ -0.77
HERC1-210ENST00000560897 CLCA2Q9UQC9 943 aa10.21□□□□□ -0.77
HERC1-210ENST00000560897 SH3BP1Q9Y3L3 701 aa10.21□□□□□ -0.77
HERC1-210ENST00000560897 HOXC11O43248 304 aaPredicted RBP10.2□□□□□ -0.78
HERC1-210ENST00000560897 ITGAVP06756 1048 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 ABCB4P21439 1286 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 MYH11P35749 1972 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 CCT6AP40227 531 aaKnown RBP10.2□□□□□ -0.78
HERC1-210ENST00000560897 GRIA4P48058 902 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 PPP3CCP48454 512 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 C21orf59P57076 290 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 ZXDBP98169 803 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 STK3Q13188 491 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 DNAJC3Q13217 504 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 C4orf17Q53FE4 359 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 INTS6LQ5JSJ4 861 aaKnown RBP10.2□□□□□ -0.78
HERC1-210ENST00000560897 ERICH6BQ5W0A0 696 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 METTL3Q86U44 580 aaKnown RBP10.2□□□□□ -0.78
HERC1-210ENST00000560897 ETFBKMTQ8IXQ9 262 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 LSMEM2Q8N112 164 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 XPO6Q96QU8 1125 aaKnown RBP10.2□□□□□ -0.78
HERC1-210ENST00000560897 ACOX2Q99424 681 aa10.2□□□□□ -0.78
HERC1-210ENST00000560897 USP36Q9P275 1121 aaKnown RBP10.2□□□□□ -0.78
HERC1-210ENST00000560897 H0Y8X5 98 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 GFRA2O00451 464 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 KCNK3O14649 394 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 TERTO14746 1132 aaKnown RBP10.19□□□□□ -0.78
HERC1-210ENST00000560897 SYNCRIPO60506 623 aaKnown RBP10.19□□□□□ -0.78
HERC1-210ENST00000560897 GRIK1P39086 918 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 ACADVLP49748 655 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 LIG4P49917 911 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 TPMTP51580 245 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 EVCP57679 992 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 NR5A1Q13285 461 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 ORC1Q13415 861 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 ILKQ13418 452 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 SERINC3Q13530 473 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 UBAP2LQ14157 1087 aaKnown RBP10.19□□□□□ -0.78
HERC1-210ENST00000560897 ENOX2Q16206 610 aaKnown RBP10.19□□□□□ -0.78
HERC1-210ENST00000560897 CFAP221Q4G0U5 840 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 FBXL19Q6PCT2 694 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 C4orf50Q6ZRC1 276 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 DENND5BQ6ZUT9 1274 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 WASF1Q92558 559 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 PRCCQ92733 491 aaPredicted RBP10.19□□□□□ -0.78
HERC1-210ENST00000560897 SIPA1Q96FS4 1042 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 FUBP3Q96I24 572 aaKnown RBP eCLIP10.19□□□□□ -0.78
HERC1-210ENST00000560897 ACBD6Q9BR61 282 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 DPH1Q9BZG8 443 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 PCED1AQ9H1Q7 454 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 ITM2CQ9NQX7 267 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 SPHK2Q9NRA0 654 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 DDX43Q9NXZ2 648 aaKnown RBP10.19□□□□□ -0.78
HERC1-210ENST00000560897 KCNK4Q9NYG8 393 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 DERAQ9Y315 318 aa10.19□□□□□ -0.78
HERC1-210ENST00000560897 ANO9A1A5B4 782 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 KPNA7A9QM74 516 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 H0YCG3 227 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 HNRNPDLO14979 420 aaKnown RBP10.18□□□□□ -0.78
HERC1-210ENST00000560897 OGTO15294 1046 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 PAPSS1O43252 624 aaPredicted RBP10.18□□□□□ -0.78
HERC1-210ENST00000560897 HUS1O60921 280 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 MYF5P13349 255 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 ACAT1P24752 427 aaKnown RBP10.18□□□□□ -0.78
HERC1-210ENST00000560897 MCM7P33993 719 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 PNPLA4P41247 253 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 FUT11Q495W5 492 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 KIAA1614Q5VZ46 1190 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 SKA1Q96BD8 255 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 MSTO1Q9BUK6 570 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 CCSER1Q9C0I3 900 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 CD248Q9HCU0 757 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 TM9SF3Q9HD45 589 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 DPP3Q9NY33 737 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 GTF3C4Q9UKN8 822 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 KIAA1024Q9UPX6 916 aa10.18□□□□□ -0.78
HERC1-210ENST00000560897 TP53BP1Q12888 1972 aaPredicted RBP10.17□□□□□ -0.78
HERC1-210ENST00000560897 ZNF840PA6NDX5 716 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 NEDD8-MDP1E9PL57 170 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 CBX4O00257 560 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 YKT6O15498 198 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 MAPTP10636 758 aaKnown RBP10.17□□□□□ -0.78
HERC1-210ENST00000560897 PCSK1P29120 753 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 MAGEA11P43364 429 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 ZNF132P52740 706 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 KDM7AQ6ZMT4 941 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 FAM124AQ86V42 546 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 CACUL1Q86Y37 369 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 GATAD2AQ86YP4 633 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 TMPRSS6Q8IU80 811 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 CACTIN-AS1Q8N1I8 211 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 PDCL2Q8N4E4 241 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 C1orf216Q8TAB5 229 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 SNRNP27Q8WVK2 155 aaKnown RBP10.17□□□□□ -0.78
HERC1-210ENST00000560897 TSC1Q92574 1164 aa10.17□□□□□ -0.78
HERC1-210ENST00000560897 ZNF274Q96GC6 653 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms