RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 BZW2Q9Y6E2 419 aaKnown RBP7.41□□□□□ -1.22
CTDSPL2-210ENST00000560834 USP3Q9Y6I4 520 aa7.41□□□□□ -1.22
CTDSPL2-210ENST00000560834 COL4A3Q01955 1670 aa7.41□□□□□ -1.22
CTDSPL2-210ENST00000560834 GOLGA6L6A8MZA4 724 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 PIK3R2O00459 728 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 PAPSS1O43252 624 aaPredicted RBP7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 RNF40O75150 1001 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 MOSPD3O75425 235 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 LCA5LO95447 670 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 CSH1P0DML2 217 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 CSH2P0DML3 217 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 SRGAP2BP0DMP2 458 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 TNFAIP3P21580 790 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 MMP8P22894 467 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 GABRB2P47870 512 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 TKTL1P51854 596 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 EPHA5P54756 1037 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 GSCP56915 257 aaPredicted RBP7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 SLC8A3P57103 927 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 DAOAP59103 153 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 GFPT1Q06210 699 aaPredicted RBP7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 VEPH1Q14D04 833 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 SLC18A3Q16572 532 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 SLC5A9Q2M3M2 681 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 C2CD6Q53TS8 623 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 PRSS36Q5K4E3 855 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 RARS2Q5T160 578 aaKnown RBP7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 CYP4A22Q5TCH4 519 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 ELMSAN1Q6PJG2 1045 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 OLFML1Q6UWY5 402 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 TMC5Q6UXY8 1006 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 CYP26C1Q6V0L0 522 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 MMS22LQ6ZRQ5 1243 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 FAM183BPQ6ZVS7 135 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 TMEM150AQ86TG1 271 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 TMEM110Q86TL2 294 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 XYLT1Q86Y38 959 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 PHF13Q86YI8 300 aaPredicted RBP7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 LRRC8AQ8IWT6 810 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 NUP93Q8N1F7 819 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 SCML4Q8N228 414 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 SMRP1Q8NCR6 262 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 SCAMP5Q8TAC9 235 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 CPA5Q8WXQ8 436 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 TSC1Q92574 1164 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 PPP1R13BQ96KQ4 1090 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 HSFY1Q96LI6 401 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 MYRFLQ96LU7 910 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 BAG1Q99933 345 aaPredicted RBP7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 C11orf70Q9BRQ4 267 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 PRKD2Q9BZL6 878 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 ULBP1Q9BZM6 244 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 ISCUQ9H1K1 167 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 S1PR5Q9H228 398 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 PDCL3Q9H2J4 239 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 KCNF1Q9H3M0 494 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 SPTLC3Q9NUV7 552 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 SEPT11Q9NVA2 429 aaKnown RBP7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 DNMT3BQ9UBC3 853 aaKnown RBP7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 ADAMTS1Q9UHI8 967 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 DPP7Q9UHL4 492 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 NAGPAQ9UK23 515 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 ASB3Q9Y575 518 aa7.4□□□□□ -1.22
CTDSPL2-210ENST00000560834 DOCK6Q96HP0 2047 aa7.4□□□□□ -1.23
CTDSPL2-210ENST00000560834 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 CCDC195A0A1B0GUA6 201 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 TCRBV5S1A1TA0A578 114 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 NCK2O43639 380 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 RTN3O95197 1032 aaPredicted RBP7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 RHOP08100 348 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 ZDHHC11BP0C7U3 371 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 GZMAP12544 262 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 LCP1P13796 627 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 HOXB8P17481 243 aaPredicted RBP7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 CCR2P41597 374 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 ACADSBP45954 432 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 NSFP46459 744 aaKnown RBP7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 PGFP49763 221 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 EPHB3P54753 998 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 NTHL1P78549 312 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 IFRD2Q12894 506 aaPredicted RBP7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 CCDC85BQ15834 202 aaPredicted RBP7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 PM20D1Q6GTS8 502 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 ACAD10Q6JQN1 1059 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 TREML4Q6UXN2 200 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 HFE2Q6ZVN8 426 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 GRASPQ7Z6J2 395 aaPredicted RBP7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 DNAJB7Q7Z6W7 309 aaPredicted RBP7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 GPR149Q86SP6 731 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 ITIH5Q86UX2 942 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 VPS36Q86VN1 386 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 RETREG3Q86VR2 466 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 TMTC1Q8IUR5 882 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 MCOLN2Q8IZK6 566 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 CCDC112Q8NEF3 446 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 PRR7Q8TB68 274 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 ADAMTS19Q8TE59 1207 aa7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 IPO4Q8TEX9 1081 aaKnown RBP7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 SMG7Q92540 1137 aaKnown RBP7.39□□□□□ -1.23
CTDSPL2-210ENST00000560834 NDRG1Q92597 394 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms