RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SNX30Q5VWJ9 437 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 TADA2BQ86TJ2 420 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 PIGZQ86VD9 579 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 TTC30AQ86WT1 665 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 CLDN23Q96B33 292 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 TUBGCP2Q9BSJ2 902 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 NUDT5Q9UKK9 219 aa13.66□□□□□ -0.22
CTDSPL2-209ENST00000560620 KCNJ18B7U540 433 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 M0QYV0 167 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 RNF225M0QZC1 329 aaPredicted RBP13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 O00370 1275 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 XPO1O14980 1071 aaKnown RBP13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 TBX18O95935 607 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 CALCAP01258 141 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 ZDHHC11BP0C7U3 371 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 CHRNB1P11230 501 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 RARGP13631 454 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 SLC9A1P19634 815 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 BRD2P25440 801 aaKnown RBP13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 GJA4P35212 333 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 PGFP49763 221 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 PSEN1P49768 467 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 KCNJ12Q14500 433 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 PPP2R5DQ14738 602 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 ARHGAP44Q17R89 818 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 DGKKQ5KSL6 1271 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 TRIM65Q6PJ69 517 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 RSRC2Q7L4I2 434 aaKnown RBP13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 CCDC186Q7Z3E2 898 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 ALYREFQ86V81 257 aaKnown RBP13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 MIB1Q86YT6 1006 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 IRF2BP1Q8IU81 584 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 SIX6OS1Q8N1H7 587 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 UBR7Q8N806 425 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 P2RY13Q9BPV8 354 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 UBXN6Q9BZV1 441 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 NMUR1Q9HB89 426 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 OSER1Q9NX31 292 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 TBC1D14Q9P2M4 693 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 NFE2L3Q9Y4A8 694 aa13.65□□□□□ -0.22
CTDSPL2-209ENST00000560620 E2F8A0AVK6 867 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 TULP2O00295 520 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 MDM4O15151 490 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 ZBED1O96006 694 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 TPM2P07951 284 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 SETSIPP0DME0 302 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 LCP1P13796 627 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 MRE11P49959 708 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 FZD5Q13467 585 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 STILQ15468 1287 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 CT47A1Q5JQC4 288 aaPredicted RBP13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 GJB7Q6PEY0 223 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 ENOSF1Q7L5Y1 443 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 ARHGAP18Q8N392 663 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 TFAP2BQ92481 460 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 CHFRQ96EP1 664 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 FAM81BQ96LP2 452 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 KREMEN1Q96MU8 473 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 ULBP1Q9BZM6 244 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 CHRDQ9H2X0 955 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 NDST4Q9H3R1 872 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 SAMSN1Q9NSI8 373 aaKnown RBP13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 APEX2Q9UBZ4 518 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 RASAL2Q9UJF2 1139 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 DNMT3LQ9UJW3 386 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 LSM7Q9UK45 103 aaKnown RBP13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 F5P12259 2224 aa13.64□□□□□ -0.23
CTDSPL2-209ENST00000560620 PIK3R2O00459 728 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 THAP12O43422 761 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 MED7O43513 233 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 LETM1O95202 739 aaPredicted RBP13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 ADH1CP00326 375 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 SP9P0CG40 484 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 CXCL12P48061 93 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 RGS7P49802 495 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 GALK1P51570 392 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 CCR3P51677 355 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 YWHAGP61981 247 aaKnown RBP eCLIP13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 ADIGQ0VDE8 80 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 CNGA2Q16280 664 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 STX1AQ16623 288 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 VWA3BQ502W6 1294 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 BTBD8Q5XKL5 378 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 ZC3H14Q6PJT7 736 aaKnown RBP13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 TSSK4Q6SA08 328 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 LCLAT1Q6UWP7 414 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 Q6ZS52 159 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 ADGRG2Q8IZP9 1017 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 ZNF687Q8N1G0 1237 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 CD101Q93033 1021 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 SECISBP2LQ93073 1101 aaKnown RBP13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 CDK5RAP1Q96SZ6 601 aaKnown RBP13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 IER2Q9BTL4 223 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 CYLDQ9NQC7 956 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 ANO10Q9NW15 660 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 FBXO4Q9UKT5 387 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 USP3Q9Y6I4 520 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms