RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
MARK3-221ENST00000560603 HOXB2P14652 356 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 ATICP31939 592 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 TUBP50607 506 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 ANO4Q32M45 955 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 C10orf76Q5T2E6 689 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 ETFBKMTQ8IXQ9 262 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 MINDY1Q8N5J2 469 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 FRMD1Q8N878 549 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 NAT16Q8N8M0 369 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 TERB1Q8NA31 727 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 SYAP1Q96A49 352 aaPredicted RBP12.79□□□□□ -0.36
MARK3-221ENST00000560603 CLIC6Q96NY7 704 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 FAM124BQ9H5Z6 455 aaPredicted RBP12.79□□□□□ -0.36
MARK3-221ENST00000560603 CAPN10Q9HC96 672 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 ZDHHC4Q9NPG8 344 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 SPHK2Q9NRA0 654 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 COMMD8Q9NX08 183 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 SUSD2Q9UGT4 822 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 KLK13Q9UKR3 277 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 STARD13Q9Y3M8 1113 aa12.79□□□□□ -0.36
MARK3-221ENST00000560603 TNRC6BQ9UPQ9 1833 aaKnown RBP12.78□□□□□ -0.36
MARK3-221ENST00000560603 A0A1W2PQD8 194 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 FAM221BA6H8Z2 402 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 COCHO43405 550 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 NDUFS2O75306 463 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 STAU1O95793 577 aaKnown RBP12.78□□□□□ -0.36
MARK3-221ENST00000560603 CST3P01034 146 aaPredicted RBP12.78□□□□□ -0.36
MARK3-221ENST00000560603 GNSP15586 552 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 GABRG2P18507 467 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 SNRPFP62306 86 aaKnown RBP12.78□□□□□ -0.36
MARK3-221ENST00000560603 AMPD3Q01432 767 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 RING1Q06587 406 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 GOLGA8FQ08AF8 430 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 GOLGA8DPQ0D2H9 430 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 SLC14A1Q13336 389 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 PSMD6Q15008 389 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 SNRNP35Q16560 246 aaKnown RBP12.78□□□□□ -0.36
MARK3-221ENST00000560603 SYCP2LQ5T4T6 812 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 SNX30Q5VWJ9 437 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 GRAMD4Q6IC98 578 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 PHTF2Q8N3S3 785 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 RDH13Q8NBN7 331 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 SCFD1Q8WVM8 642 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 TNIP3Q96KP6 325 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 XPO6Q96QU8 1125 aaKnown RBP12.78□□□□□ -0.36
MARK3-221ENST00000560603 CGRRF1Q99675 332 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 MED10Q9BTT4 135 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 B3GNT5Q9BYG0 378 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 FGFBP2Q9BYJ0 223 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 PANK2Q9BZ23 570 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 TNMDQ9H2S6 317 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 DMAP1Q9NPF5 467 aaPredicted RBP12.78□□□□□ -0.36
MARK3-221ENST00000560603 CALCOCO1Q9P1Z2 691 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 CHORDC1Q9UHD1 332 aaPredicted RBP12.78□□□□□ -0.36
MARK3-221ENST00000560603 PCDHB9Q9Y5E1 797 aa12.78□□□□□ -0.36
MARK3-221ENST00000560603 IGHV1OR15-9A0A0B4J2B8 117 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 CLDN5O00501 218 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 PHACTR2O75167 634 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 CLSTN1O94985 981 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 CD2BP2O95400 341 aaKnown RBP12.77□□□□□ -0.37
MARK3-221ENST00000560603 CACNA2D1P54289 1103 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 CEBPZQ03701 1054 aaKnown RBP12.77□□□□□ -0.37
MARK3-221ENST00000560603 WDR45BQ5MNZ6 344 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 TMEM25Q86YD3 366 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 BBS7Q8IWZ6 715 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 CHPFQ8IZ52 775 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 RGL4Q8IZJ4 473 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 CHCHD4Q8N4Q1 142 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 DEFB119Q8N690 84 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 TRIML1Q8N9V2 468 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 XXYLT1Q8NBI6 393 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 FOXJ1Q92949 421 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 CCDC127Q96BQ5 260 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 SMARCD1Q96GM5 515 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 ZFRQ96KR1 1074 aaKnown RBP12.77□□□□□ -0.37
MARK3-221ENST00000560603 DPEP3Q9H4B8 488 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 FSCN3Q9NQT6 498 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.77□□□□□ -0.372e-8■■■■■ 48.9
MARK3-221ENST00000560603 DNAJC17Q9NVM6 304 aaKnown RBP12.77□□□□□ -0.37
MARK3-221ENST00000560603 DNAAF2Q9NVR5 837 aaKnown RBP12.77□□□□□ -0.37
MARK3-221ENST00000560603 WDR35Q9P2L0 1181 aa12.77□□□□□ -0.37
MARK3-221ENST00000560603 NXF1Q9UBU9 619 aaKnown RBP12.77□□□□□ -0.37
MARK3-221ENST00000560603 LSM7Q9UK45 103 aaKnown RBP12.77□□□□□ -0.37
MARK3-221ENST00000560603 MORC2Q9Y6X9 1032 aaPredicted RBP12.77□□□□□ -0.37
MARK3-221ENST00000560603 IRF1P10914 325 aa12.76□□□□□ -0.37
MARK3-221ENST00000560603 HOXB3P14651 431 aaPredicted RBP12.76□□□□□ -0.37
MARK3-221ENST00000560603 TRIM21P19474 475 aaKnown RBP12.76□□□□□ -0.37
MARK3-221ENST00000560603 WASP42768 502 aa12.76□□□□□ -0.37
MARK3-221ENST00000560603 CYP2J2P51589 502 aa12.76□□□□□ -0.37
MARK3-221ENST00000560603 SLC5A3P53794 718 aa12.76□□□□□ -0.37
MARK3-221ENST00000560603 CYP24A1Q07973 514 aa12.76□□□□□ -0.37
MARK3-221ENST00000560603 TRIP6Q15654 476 aaKnown RBP12.76□□□□□ -0.37
MARK3-221ENST00000560603 PLEKHG6Q3KR16 790 aa12.76□□□□□ -0.37
MARK3-221ENST00000560603 RAB44Q7Z6P3 723 aaPredicted RBP12.76□□□□□ -0.37
MARK3-221ENST00000560603 FAM35AQ86V20 835 aa12.76□□□□□ -0.37
MARK3-221ENST00000560603 PDILTQ8N807 584 aa12.76□□□□□ -0.37
MARK3-221ENST00000560603 SCAMP5Q8TAC9 235 aa12.76□□□□□ -0.37
MARK3-221ENST00000560603 IPO4Q8TEX9 1081 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms