RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 CTSAP10619 480 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 HAPLN1P10915 354 aaPredicted RBP9.01□□□□□ -0.97
TRAF3-209ENST00000560463 ATF2P15336 505 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 GTF2F1P35269 517 aaKnown RBP eCLIP9.01□□□□□ -0.97
TRAF3-209ENST00000560463 BMPR1AP36894 532 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 SSR1P43307 286 aaKnown RBP9.01□□□□□ -0.97
TRAF3-209ENST00000560463 PSEN1P49768 467 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 NDUFV1P49821 464 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 SLC5A3P53794 718 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 COPS2P61201 443 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 RAB33AQ14088 237 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 SLC25A52Q3SY17 297 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 CCDC14Q49A88 953 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 BOLA3Q53S33 107 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 COL13A1Q5TAT6 717 aaPredicted RBP9.01□□□□□ -0.97
TRAF3-209ENST00000560463 RSPO2Q6UXX9 243 aaPredicted RBP9.01□□□□□ -0.97
TRAF3-209ENST00000560463 RNF19BQ6ZMZ0 732 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 DENND5BQ6ZUT9 1274 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 GPRIN1Q7Z2K8 1008 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 SCN4BQ8IWT1 228 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 RCOR2Q8IZ40 523 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 ARHGAP18Q8N392 663 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 KLHL23Q8NBE8 558 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 COG1Q8WTW3 980 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 ALG3Q92685 438 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 FAM149B1Q96BN6 582 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 RBM41Q96IZ5 413 aaKnown RBP9.01□□□□□ -0.97
TRAF3-209ENST00000560463 CAPZA3Q96KX2 299 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 RNPC3Q96LT9 517 aaKnown RBP9.01□□□□□ -0.97
TRAF3-209ENST00000560463 SLC2A13Q96QE2 648 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 TBCBQ99426 244 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 PSMB7Q99436 277 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 C11orf84Q9BUA3 381 aaPredicted RBP9.01□□□□□ -0.97
TRAF3-209ENST00000560463 RHOBTB2Q9BYZ6 727 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 RXFP1Q9HBX9 757 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 ABCC13Q9NSE7 274 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 IL37Q9NZH6 218 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 SCML2Q9UQR0 700 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 IRAK3Q9Y616 596 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 MIA3Q5JRA6 1907 aa9.01□□□□□ -0.97
TRAF3-209ENST00000560463 FAM92AA1XBS5 289 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 LINC01553A4QN01 128 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 YJEFN3A6XGL0 299 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 E7ENQ6 273 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 CCDC188H7C350 402 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 C2CD2LO14523 706 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 CTIFO43310 598 aaKnown RBP9□□□□□ -0.97
TRAF3-209ENST00000560463 PRPSAP2O60256 369 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 LILRB3O75022 631 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 ZRANB2O95218 330 aaKnown RBP eCLIP9□□□□□ -0.97
TRAF3-209ENST00000560463 VNN2O95498 520 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 TRUB2O95900 331 aaKnown RBP9□□□□□ -0.97
TRAF3-209ENST00000560463 C1RP00736 705 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 F9P00740 461 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 USP17L7P0C7H9 530 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 CTNNB1P35222 781 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 MAGEA10P43363 369 aaPredicted RBP9□□□□□ -0.97
TRAF3-209ENST00000560463 DNA2P51530 1060 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 AIF1P55008 147 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 ARPP19P56211 112 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 TAS2R40P59535 323 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 SLC25A11Q02978 314 aaKnown RBP9□□□□□ -0.97
TRAF3-209ENST00000560463 DUSP4Q13115 394 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 TAF5Q15542 800 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 PPP2R5EQ16537 467 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 PTPROQ16827 1216 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 MGAT5BQ3V5L5 792 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 DCAF6Q58WW2 860 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 ODF2Q5BJF6 829 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 DCAF12L1Q5VU92 463 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 TRNP1Q6NT89 227 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 BNIPLQ7Z465 357 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 MON1AQ86VX9 555 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 VSIG1Q86XK7 387 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 TCEAL8Q8IYN2 117 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 DEFB106AQ8N104 65 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 ATAD1Q8NBU5 361 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 FAM172AQ8WUF8 416 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 TEKT4Q8WW24 435 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 KRT35Q92764 455 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 PGAP3Q96FM1 320 aaPredicted RBP9□□□□□ -0.97
TRAF3-209ENST00000560463 CFAP57Q96MR6 1250 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 PGLYRP2Q96PD5 576 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 NPY6RQ99463 290 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 USP18Q9UMW8 372 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 EFR3BQ9Y2G0 817 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 PCDHA11Q9Y5I1 949 aa9□□□□□ -0.97
TRAF3-209ENST00000560463 TNRC18O15417 2968 aaPredicted RBP8.99□□□□□ -0.97
TRAF3-209ENST00000560463 MDM4O15151 490 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 TADA3O75528 432 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 FGGP02679 453 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 PYGMP11217 842 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 NCAM1P13591 858 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 RPL17P18621 184 aaKnown RBP8.99□□□□□ -0.97
TRAF3-209ENST00000560463 YWHAQP27348 245 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 MIPP30301 263 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 GBP1P32455 592 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 ELF1P32519 619 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 PTPN7P35236 360 aa8.99□□□□□ -0.97
TRAF3-209ENST00000560463 MARCKSL1P49006 195 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms