RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 MTERF2Q49AM1 385 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 CCDC184Q52MB2 194 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 ZMYM1Q5SVZ6 1142 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 MEI1Q5TIA1 1274 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 TAOK1Q7L7X3 1001 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 ZNF438Q7Z4V0 828 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 ITIH5Q86UX2 942 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 MAB21L3Q8N8X9 362 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 HPS3Q969F9 1004 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 SEC16BQ96JE7 1060 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 SUSD3Q96L08 255 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 PNKPQ96T60 521 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 RNF41Q9H4P4 317 aaPredicted RBP7.01□□□□□ -1.29
HERC1-208ENST00000560462 WSB2Q9NYS7 404 aaPredicted RBP7.01□□□□□ -1.29
HERC1-208ENST00000560462 FOXD3Q9UJU5 478 aaPredicted RBP7.01□□□□□ -1.29
HERC1-208ENST00000560462 TNNQ9UQP3 1299 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 WASF2Q9Y6W5 498 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 RP1L1Q8IWN7 2480 aaPredicted RBP7.01□□□□□ -1.29
HERC1-208ENST00000560462 NEDD4P46934 1319 aa7.01□□□□□ -1.29
HERC1-208ENST00000560462 ANK1P16157 1881 aa7□□□□□ -1.29
HERC1-208ENST00000560462 KNL1Q8NG31 2342 aa7□□□□□ -1.29
HERC1-208ENST00000560462 CYP26A1O43174 497 aa7□□□□□ -1.29
HERC1-208ENST00000560462 FGAP02671 866 aa7□□□□□ -1.29
HERC1-208ENST00000560462 ACP1P24666 158 aa7□□□□□ -1.29
HERC1-208ENST00000560462 CTSKP43235 329 aa7□□□□□ -1.29
HERC1-208ENST00000560462 TNFRSF4P43489 277 aa7□□□□□ -1.29
HERC1-208ENST00000560462 RNF144AP50876 292 aaPredicted RBP7□□□□□ -1.29
HERC1-208ENST00000560462 CLCNKBP51801 687 aa7□□□□□ -1.29
HERC1-208ENST00000560462 MESP2Q0VG99 397 aa7□□□□□ -1.29
HERC1-208ENST00000560462 DUSP4Q13115 394 aa7□□□□□ -1.29
HERC1-208ENST00000560462 DDX10Q13206 875 aaKnown RBP7□□□□□ -1.29
HERC1-208ENST00000560462 ZNF268Q14587 947 aaPredicted RBP7□□□□□ -1.29
HERC1-208ENST00000560462 PCBP1Q15365 356 aaKnown RBP eCLIP7□□□□□ -1.29
HERC1-208ENST00000560462 CDCP2Q5VXM1 449 aa7□□□□□ -1.29
HERC1-208ENST00000560462 EGFLAMQ63HQ2 1017 aa7□□□□□ -1.29
HERC1-208ENST00000560462 ZNF280DQ6N043 979 aa7□□□□□ -1.29
HERC1-208ENST00000560462 BORAQ6PGQ7 559 aa7□□□□□ -1.29
HERC1-208ENST00000560462 LAYNQ6UX15 382 aa7□□□□□ -1.29
HERC1-208ENST00000560462 KIAA1324Q6UXG2 1013 aaKnown RBP7□□□□□ -1.29
HERC1-208ENST00000560462 CD300LGQ6UXG3 332 aa7□□□□□ -1.29
HERC1-208ENST00000560462 RSRC2Q7L4I2 434 aaKnown RBP7□□□□□ -1.29
HERC1-208ENST00000560462 CLEC14AQ86T13 490 aa7□□□□□ -1.29
HERC1-208ENST00000560462 SGMS1Q86VZ5 419 aa7□□□□□ -1.29
HERC1-208ENST00000560462 TBC1D10CQ8IV04 446 aa7□□□□□ -1.29
HERC1-208ENST00000560462 ARL14Q8N4G2 192 aa7□□□□□ -1.29
HERC1-208ENST00000560462 TMEM57Q8N5G2 664 aa7□□□□□ -1.29
HERC1-208ENST00000560462 C9orf43Q8TAL5 461 aaPredicted RBP7□□□□□ -1.29
HERC1-208ENST00000560462 SAP25Q8TEE9 199 aa7□□□□□ -1.29
HERC1-208ENST00000560462 PDCD6IPQ8WUM4 868 aaKnown RBP7□□□□□ -1.29
HERC1-208ENST00000560462 SNX19Q92543 992 aa7□□□□□ -1.29
HERC1-208ENST00000560462 ITPKCQ96DU7 683 aa7□□□□□ -1.29
HERC1-208ENST00000560462 LURAP1Q96LR2 239 aa7□□□□□ -1.29
HERC1-208ENST00000560462 PIF1Q9H611 641 aa7□□□□□ -1.29
HERC1-208ENST00000560462 RUBCNLQ9H714 662 aa7□□□□□ -1.29
HERC1-208ENST00000560462 ZNF71Q9NQZ8 489 aaPredicted RBP7□□□□□ -1.29
HERC1-208ENST00000560462 TBC1D22BQ9NU19 505 aa7□□□□□ -1.29
HERC1-208ENST00000560462 SLCO1B1Q9Y6L6 691 aa7□□□□□ -1.29
HERC1-208ENST00000560462 V9GY48 417 aaPredicted RBP7□□□□□ -1.29
HERC1-208ENST00000560462 ZFC3H1O60293 1989 aaKnown RBP6.99□□□□□ -1.29
HERC1-208ENST00000560462 A0A0A0MRY4 1105 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 SYN3O14994 580 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 PHACTR2O75167 634 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 NPTXRO95502 500 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 CT47B1P0C2W7 299 aaPredicted RBP6.99□□□□□ -1.29
HERC1-208ENST00000560462 DDX6P26196 483 aaKnown RBP eCLIP6.99□□□□□ -1.29
HERC1-208ENST00000560462 NTSR1P30989 418 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 GRIA2P42262 883 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 WASP42768 502 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 PLA2G4AP47712 749 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 NT5C2P49902 561 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 SRSF6Q13247 344 aaKnown RBP6.99□□□□□ -1.29
HERC1-208ENST00000560462 PWP1Q13610 501 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 UPP1Q16831 310 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 GAB4Q2WGN9 574 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 KCNT1Q5JUK3 1230 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 IFIT1BQ5T764 474 aaKnown RBP6.99□□□□□ -1.29
HERC1-208ENST00000560462 SLC27A1Q6PCB7 646 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 ZNF662Q6ZS27 426 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 ADAT2Q7Z6V5 191 aaKnown RBP6.99□□□□□ -1.29
HERC1-208ENST00000560462 GALNT12Q8IXK2 581 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 C3orf58Q8NDZ4 430 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 BEST2Q8NFU1 509 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 PRPF31Q8WWY3 499 aaKnown RBP6.99□□□□□ -1.29
HERC1-208ENST00000560462 HTR3CQ8WXA8 447 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 PMEPA1Q969W9 287 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 ERLEC1Q96DZ1 483 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 MRGPRX1Q96LB2 322 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 HEXIM2Q96MH2 286 aaKnown RBP6.99□□□□□ -1.29
HERC1-208ENST00000560462 PGLYRP2Q96PD5 576 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 CEP89Q96ST8 783 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 ELF4Q99607 663 aaPredicted RBP6.99□□□□□ -1.29
HERC1-208ENST00000560462 JPH2Q9BR39 696 aaPredicted RBP6.99□□□□□ -1.29
HERC1-208ENST00000560462 SH2D3AQ9BRG2 576 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 RSRP1Q9BUV0 290 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 SLC6A17Q9H1V8 727 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 CRISPLD1Q9H336 500 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 TM9SF3Q9HD45 589 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 OSGEPQ9NPF4 335 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 ARHGEF4Q9NR80 690 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 TJP2Q9UDY2 1190 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms