RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 EMC1Q8N766 993 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 UHMK1Q8TAS1 419 aaKnown RBP10.13□□□□□ -0.79
RTF1-206ENST00000560447 MDM1Q8TC05 714 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 SPATA18Q8TC71 538 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.13□□□□□ -0.79
RTF1-206ENST00000560447 DYDC1Q8WWB3 177 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 SOCS4Q8WXH5 440 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 CPT1BQ92523 772 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 CENPIQ92674 756 aaPredicted RBP10.13□□□□□ -0.79
RTF1-206ENST00000560447 KAT2BQ92831 832 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 LRRC39Q96DD0 335 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 ZBTB10Q96DT7 871 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 C9orf72Q96LT7 481 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 TMEM121Q9BTD3 319 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 AP5M1Q9H0R1 490 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 ACSS3Q9H6R3 686 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 PNPLA8Q9NP80 782 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 SETD4Q9NVD3 440 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 PSMC3IPQ9P2W1 217 aaPredicted RBP10.13□□□□□ -0.79
RTF1-206ENST00000560447 TJP2Q9UDY2 1190 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 SNX9Q9Y5X1 595 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 SF3B1O75533 1304 aaKnown RBP eCLIP10.12□□□□□ -0.79
RTF1-206ENST00000560447 FAM47DPA6NHR8 397 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 APOL1O14791 398 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 DYNC1LI2O43237 492 aaPredicted RBP10.12□□□□□ -0.79
RTF1-206ENST00000560447 RECQL4O94761 1208 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 OAS1P00973 400 aaKnown RBP10.12□□□□□ -0.79
RTF1-206ENST00000560447 IGHA2P01877 340 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 AIF1P55008 147 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 SLC8A3P57103 927 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 GEMIN4P57678 1058 aaKnown RBP10.12□□□□□ -0.79
RTF1-206ENST00000560447 INHBEP58166 350 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 ACTN3Q08043 901 aaPredicted RBP10.12□□□□□ -0.79
RTF1-206ENST00000560447 PDIA2Q13087 525 aaKnown RBP10.12□□□□□ -0.79
RTF1-206ENST00000560447 IFT88Q13099 833 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 KRT81Q14533 505 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 SNX17Q15036 470 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 DPYSL2Q16555 572 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 KIZQ2M2Z5 673 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 CCDC14Q49A88 953 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 TTC31Q49AM3 519 aaPredicted RBP10.12□□□□□ -0.79
RTF1-206ENST00000560447 CCDC38Q502W7 563 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 EFHC1Q5JVL4 640 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 PPP1R26Q5T8A7 1209 aaPredicted RBP10.12□□□□□ -0.79
RTF1-206ENST00000560447 TTC30AQ86WT1 665 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 CDKL3Q8IVW4 592 aaPredicted RBP10.12□□□□□ -0.79
RTF1-206ENST00000560447 GLIS1Q8NBF1 620 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 MCUQ8NE86 351 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 UBA3Q8TBC4 463 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 PYROXD1Q8WU10 500 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 ZMAT2Q96NC0 199 aaKnown RBP10.12□□□□□ -0.79
RTF1-206ENST00000560447 PRMT1Q99873 361 aaKnown RBP10.12□□□□□ -0.79
RTF1-206ENST00000560447 MRPL45Q9BRJ2 306 aaKnown RBP10.12□□□□□ -0.79
RTF1-206ENST00000560447 DHRS4Q9BTZ2 278 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 C11orf84Q9BUA3 381 aaPredicted RBP10.12□□□□□ -0.79
RTF1-206ENST00000560447 SNX25Q9H3E2 840 aa10.12□□□□□ -0.79
RTF1-206ENST00000560447 SMIM28A0A1B0GU29 152 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 C17orf102A2RUQ5 167 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 CCT8L1PA6NM43 557 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 A8MXQ7 604 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 KPNA7A9QM74 516 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 HACD1B0YJ81 288 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 RASA4BC9J798 803 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 XPO1O14980 1071 aaKnown RBP10.11□□□□□ -0.79
RTF1-206ENST00000560447 RASA4O43374 803 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 SNX3O60493 162 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 HUS1O60921 280 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 CSDE1O75534 798 aaKnown RBP10.11□□□□□ -0.79
RTF1-206ENST00000560447 SUN1O94901 812 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 IFNB1P01574 187 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 ZSCAN5DPP0CG00 497 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 STX2P32856 288 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 GNL1P36915 607 aaPredicted RBP10.11□□□□□ -0.79
RTF1-206ENST00000560447 ZNF135P52742 658 aaPredicted RBP10.11□□□□□ -0.79
RTF1-206ENST00000560447 PRSS12P56730 875 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 BCAR1P56945 870 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 NKX3-2P78367 333 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 PDE4CQ08493 712 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 KCNJ11Q14654 390 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 QPCTQ16769 361 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 SOWAHAQ2M3V2 549 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 SMTNL2Q2TAL5 461 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 KCNT1Q5JUK3 1230 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 UBAP2Q5T6F2 1119 aaKnown RBP10.11□□□□□ -0.79
RTF1-206ENST00000560447 PMF1Q6P1K2 205 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 DARS2Q6PI48 645 aaKnown RBP10.11□□□□□ -0.79
RTF1-206ENST00000560447 ACOT1Q86TX2 421 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 LRRC34Q8IZ02 419 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 ZBED8Q8IZ13 594 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 APPL2Q8NEU8 664 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 OR6B3Q8NGW1 331 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 FAM172AQ8WUF8 416 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 KCTD13Q8WZ19 329 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 CCT6BQ92526 530 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 HSPH1Q92598 858 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 PEBP4Q96S96 227 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 SMC6Q96SB8 1091 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 OSMRQ99650 979 aa10.11□□□□□ -0.79
RTF1-206ENST00000560447 HNRNPABQ99729 332 aaKnown RBP10.11□□□□□ -0.79
RTF1-206ENST00000560447 APBA2Q99767 749 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms