RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 ZNF883P0CG24 379 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 PLA2G2AP14555 144 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 ANXA13P27216 316 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 ABCD1P33897 745 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 BNC1Q01954 994 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 TAF10Q12962 218 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 DBX2Q6ZNG2 339 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 LIMS2Q7Z4I7 341 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 TMEM25Q86YD3 366 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 BRSK2Q8IWQ3 736 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 CSGALNACT2Q8N6G5 542 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 OTUB2Q96DC9 234 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 MRGPRX1Q96LB2 322 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 GABRG3Q99928 467 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 FAM213AQ9BRX8 229 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 ST6GALNAC4Q9H4F1 302 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 GAREM1Q9H706 876 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 PRDM16Q9HAZ2 1276 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 BLOC1S4Q9NUP1 217 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 EHD2Q9NZN4 543 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 CDH9Q9ULB4 789 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 FNDC3AQ9Y2H6 1198 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 RAD54BQ9Y620 910 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 PIEZO2Q9H5I5 2752 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 FAM149AA5PLN7 773 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 F8VP50 259 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 TULP1O00294 542 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 TRIM66O15016 1216 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 ATXN7O15265 892 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 ZBTB24O43167 697 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 KRT19P08727 400 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 ABCG1P45844 678 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 CYP27A1Q02318 531 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 MCM6Q14566 821 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 PREPLQ4J6C6 727 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 BTBD8Q5XKL5 378 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 BBS7Q8IWZ6 715 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 CHPFQ8IZ52 775 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 GALNT15Q8N3T1 639 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 ZCCHC9Q8N567 271 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 PIP4K2CQ8TBX8 421 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 CACTINQ8WUQ7 758 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 PCED1BQ96HM7 432 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 DCBLD2Q96PD2 775 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 TM7SF3Q9NS93 570 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 TMEM30AQ9NV96 361 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 ITGA11Q9UKX5 1188 aa13.64□□□□□ -0.23
RABGGTA-213ENST00000560127 GOLGA8CPA6NN73 597 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 COCHO43405 550 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 TBCAO75347 108 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 PPP1R37O75864 691 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 CER1O95813 267 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 KRT18P05783 430 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 PDGFRBP09619 1106 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 CD6P30203 668 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 CACNA2D1P54289 1103 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 HMGN5P82970 282 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 RBP5P82980 135 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 POSTNQ15063 836 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 MAPRE1Q15691 268 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 ANO4Q32M45 955 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 NUDT18Q6ZVK8 323 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 DPH6Q7L8W6 267 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 FAM184AQ8NB25 1140 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 WBP2Q969T9 261 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 SAAL1Q96ER3 474 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 C8orf48Q96LL4 319 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 CDC6Q99741 560 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 SPHK2Q9NRA0 654 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 WSB2Q9NYS7 404 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 NFE2L3Q9Y4A8 694 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 PCDHGB2Q9Y5G2 931 aa13.63□□□□□ -0.23
RABGGTA-213ENST00000560127 MEI4A8MW99 385 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 PRRT4C9JH25 899 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 FLRT2O43155 660 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 NCAM1P13591 858 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 ITPKBP27987 946 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 MATKP42679 507 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 KCNA1Q09470 495 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 IFRD2Q12894 506 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 SMAD1Q15797 465 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 HLA-BQ31612 363 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 TDRD10Q5VZ19 366 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 GRAMD4Q6IC98 578 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 SDE2Q6IQ49 451 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 KIAA1324Q6UXG2 1013 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 ZNF720Q7Z2F6 126 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 PDCD7Q8N8D1 485 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 MYCBPAPQ8TBZ2 947 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 RHBDD1Q8TEB9 315 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 RAD54LQ92698 747 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 TOE1Q96GM8 510 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 SLITRK1Q96PX8 696 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 DUSP9Q99956 384 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 STRA6Q9BX79 667 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 GPR174Q9BXC1 333 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 MTMR12Q9C0I1 747 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 MIR1-1HGQ9H1L0 117 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 PRORYQ9H606 182 aa13.62□□□□□ -0.23
RABGGTA-213ENST00000560127 DNAJC17Q9NVM6 304 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms