RNA–Protein interactions for RNA: ENST00000559863.1

IRF9-206, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-206ENST00000559863 ACTL6BO94805 426 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 RPN1P04843 607 aaKnown RBP12.36□□□□□ -0.43
IRF9-206ENST00000559863 NPPBP16860 134 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 NR1H2P55055 460 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 NOMO3P69849 1222 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 CRHR2Q13324 411 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 KIF22Q14807 665 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 TRIM71Q2Q1W2 868 aaKnown RBP12.36□□□□□ -0.43
IRF9-206ENST00000559863 TMEM200BQ69YZ2 307 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 OTUD7BQ6GQQ9 843 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 AOPEPQ8N6M6 819 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 PIK3C3Q8NEB9 887 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 ALG3Q92685 438 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 NKD2Q969F2 451 aaPredicted RBP12.36□□□□□ -0.43
IRF9-206ENST00000559863 SPSB4Q96A44 273 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 HVCN1Q96D96 273 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 RRP36Q96EU6 259 aaKnown RBP12.36□□□□□ -0.43
IRF9-206ENST00000559863 RBM15Q96T37 977 aaKnown RBP eCLIP12.36□□□□□ -0.43
IRF9-206ENST00000559863 DDX23Q9BUQ8 820 aaKnown RBP12.36□□□□□ -0.43
IRF9-206ENST00000559863 CCDC68Q9H2F9 335 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 SPATA6Q9NWH7 488 aaPredicted RBP12.36□□□□□ -0.43
IRF9-206ENST00000559863 RBPJLQ9UBG7 517 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 MAGEL2Q9UJ55 1249 aa12.36□□□□□ -0.43
IRF9-206ENST00000559863 SCAF8Q9UPN6 1271 aaKnown RBP12.36□□□□□ -0.43
IRF9-206ENST00000559863 MTO1Q9Y2Z2 717 aaKnown RBP12.36□□□□□ -0.43
IRF9-206ENST00000559863 EGR1P18146 543 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 FSTP19883 344 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 GLRBP48167 497 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 TERF1P54274 439 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 AP2B1P63010 937 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 SLC12A1Q13621 1099 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 MYBPC2Q14324 1141 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 ARHGAP15Q53QZ3 475 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 ATPAF1Q5TC12 328 aaPredicted RBP12.35□□□□□ -0.43
IRF9-206ENST00000559863 CD300LDQ6UXZ3 194 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 GALNT5Q7Z7M9 940 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 SMCR8Q8TEV9 937 aaPredicted RBP12.35□□□□□ -0.43
IRF9-206ENST00000559863 PCDH18Q9HCL0 1135 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 ZFP69BQ9UJL9 534 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 VWA7Q9Y334 891 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 PLEKHM1Q9Y4G2 1056 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 LAMB1P07942 1786 aa12.35□□□□□ -0.43
IRF9-206ENST00000559863 NUDT19A8MXV4 375 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 FCHO1O14526 889 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 N4BP3O15049 544 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 GYPEP15421 78 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 HOXD12P35452 270 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 SP140Q13342 867 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 RAB3GAP1Q15042 981 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 PLXDC1Q8IUK5 500 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 TRMT2AQ8IZ69 625 aaKnown RBP12.34□□□□□ -0.43
IRF9-206ENST00000559863 PCSK9Q8NBP7 692 aaKnown RBP12.34□□□□□ -0.43
IRF9-206ENST00000559863 ZMIZ2Q8NF64 920 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 OR6Y1Q8NGX8 325 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 ADAMTS15Q8TE58 950 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 RSC1A1Q92681 617 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 CELF1Q92879 486 aaKnown RBP12.34□□□□□ -0.43
IRF9-206ENST00000559863 FAM89AQ96GI7 184 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 SDF4Q9BRK5 362 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 RTKNQ9BST9 563 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 ORC3Q9UBD5 711 aaPredicted RBP12.34□□□□□ -0.43
IRF9-206ENST00000559863 ARHGAP26Q9UNA1 814 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 GPR34Q9UPC5 381 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 SLC5A6Q9Y289 635 aa12.34□□□□□ -0.43
IRF9-206ENST00000559863 COL1A1P02452 1464 aaPredicted RBP12.34□□□□□ -0.43
IRF9-206ENST00000559863 A0A087WWL8 130 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 ALDH1A2O94788 518 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 EFEMP2O95967 443 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 RARBP10826 455 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 PTPN7P35236 360 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 GATA4P43694 442 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 CAP1Q01518 475 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 CHRNDQ07001 517 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 ADAM9Q13443 819 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 SF3B3Q15393 1217 aaKnown RBP12.33□□□□□ -0.44
IRF9-206ENST00000559863 TWISTNBQ3B726 338 aaPredicted RBP12.33□□□□□ -0.44
IRF9-206ENST00000559863 SPECC1Q5M775 1068 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 FAM26FQ5R3K3 315 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 ZC3H14Q6PJT7 736 aaKnown RBP12.33□□□□□ -0.44
IRF9-206ENST00000559863 G2E3Q7L622 706 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 APOBEC3FQ8IUX4 373 aaKnown RBP12.33□□□□□ -0.44
IRF9-206ENST00000559863 IL17RDQ8NFM7 739 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 OR56A3Q8NH54 315 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 RILPL2Q969X0 211 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 COG8Q96MW5 612 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 HTATIP2Q9BUP3 242 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 PACSIN1Q9BY11 444 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 PABPC3Q9H361 631 aaKnown RBP12.33□□□□□ -0.44
IRF9-206ENST00000559863 MLXIPQ9HAP2 919 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 TMEM160Q9NX00 188 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 MID2Q9UJV3 735 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 ANGEL1Q9UNK9 670 aaKnown RBP12.33□□□□□ -0.44
IRF9-206ENST00000559863 HS3ST4Q9Y661 456 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 IL16Q14005 1332 aa12.33□□□□□ -0.44
IRF9-206ENST00000559863 FAM170AA1A519 330 aa12.32□□□□□ -0.44
IRF9-206ENST00000559863 PGPEP1LA6NFU8 196 aa12.32□□□□□ -0.44
IRF9-206ENST00000559863 WNT10BO00744 389 aa12.32□□□□□ -0.44
IRF9-206ENST00000559863 ITGA10O75578 1167 aa12.32□□□□□ -0.44
IRF9-206ENST00000559863 IL18BPO95998 194 aa12.32□□□□□ -0.44
IRF9-206ENST00000559863 TK1P04183 234 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms