RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 HELZP42694 1942 aaKnown RBP14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 TICRRQ7Z2Z1 1910 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 MBL2P11226 248 aaPredicted RBP14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 GLULP15104 373 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 MLLT6P55198 1093 aaPredicted RBP14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 BPIFB4P59827 614 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 ZXDBP98169 803 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 MTF1Q14872 753 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 DRAP1Q14919 205 aaPredicted RBP14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 ZNF77Q15935 545 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 PMF1Q6P1K2 205 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 APTXQ7Z2E3 356 aaKnown RBP14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 FAM71AQ8IYT1 594 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 ARHGAP18Q8N392 663 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 ZNF276Q8N554 614 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 KIAA1958Q8N8K9 716 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 HSFY1Q96LI6 401 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 FAM83CQ9BQN1 747 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 STK33Q9BYT3 514 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 NACA2Q9H009 215 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 ACP6Q9NPH0 428 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 NAGPAQ9UK23 515 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 DAAM1Q9Y4D1 1078 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 FHOD1Q9Y613 1164 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 CPQQ9Y646 472 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 A0A1W2PQH9 124 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 LEFTY2O00292 366 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 RARGP13631 454 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 ATP5C1P36542 298 aaKnown RBP14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 GPD2P43304 727 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 USP4Q13107 963 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 SCD5Q86SK9 330 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 DDX42Q86XP3 938 aaKnown RBP eCLIP14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 SIX6OS1Q8N1H7 587 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 RIN3Q8TB24 985 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 ERGIC2Q96RQ1 377 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 TBC1D17Q9HA65 648 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 NMUR1Q9HB89 426 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 FAM207AQ9NSI2 230 aaPredicted RBP14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 OSER1Q9NX31 292 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 MAN2B1O00754 1011 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 RALAP11233 206 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 CLCN1P35523 988 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 ADIGQ0VDE8 80 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 PDGFRLQ15198 375 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 SYCP1Q15431 976 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 ASTLQ6HA08 431 aaPredicted RBP14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 KLHDC10Q6PID8 442 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 ZNF852Q6ZMS4 543 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 TPRG1Q6ZUI0 275 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 TADA2BQ86TJ2 420 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 OSCP1Q8WVF1 389 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 PCMTD1Q96MG8 357 aaPredicted RBP14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 CDK5RAP1Q96SZ6 601 aaKnown RBP14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 NELL2Q99435 816 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 DDX23Q9BUQ8 820 aaKnown RBP14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 ULBP1Q9BZM6 244 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 CBX8Q9HC52 389 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 CNGB3Q9NQW8 809 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 SMPD4Q9NXE4 827 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 GTSE1Q9NYZ3 720 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 SIK3Q9Y2K2 1263 aa14.37□□□□□ -0.11
CHRNB4-204ENST00000559849 WDFY4Q6ZS81 3184 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 KANSL1LA0AUZ9 987 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 TBX18O95935 607 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 AVPR2P30518 371 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 RGS7P49802 495 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 KLK7P49862 253 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 KPNA1P52294 538 aaPredicted RBP14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 TPM4P67936 248 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 TNK2Q07912 1038 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 FILIP1LQ4L180 1135 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 C1orf228Q6PIY5 440 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 SCML4Q8N228 414 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 STK32AQ8WU08 396 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 GANQ9H2C0 597 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 C8orf33Q9H7E9 229 aaPredicted RBP14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 DUS2Q9NX74 493 aaKnown RBP14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 PIAS3Q9Y6X2 628 aa14.36□□□□□ -0.11
CHRNB4-204ENST00000559849 PNMA6AP0CW24 399 aaPredicted RBP14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 LCP1P13796 627 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 AOC1P19801 751 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 CD72P21854 359 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 KRT9P35527 623 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 POLR2FP61218 127 aaKnown RBP14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 YWHAGP61981 247 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 RUNX3Q13761 415 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 ITPRIPL2Q3MIP1 535 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 C10orf120Q5SQS8 335 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 SLC47A2Q86VL8 602 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 NEK11Q8NG66 645 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 MSANTD3Q96H12 275 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 ZFRQ96KR1 1074 aaKnown RBP14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 EBF3Q9H4W6 596 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 ST7Q9NRC1 585 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 DNMT3LQ9UJW3 386 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 PCDHGC3Q9UN70 934 aa14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 MRPS17Q9Y2R5 130 aaKnown RBP14.35□□□□□ -0.11
CHRNB4-204ENST00000559849 SIT1Q9Y3P8 196 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms