RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 FBXO32Q969P5 355 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 ZNF419Q96HQ0 510 aaPredicted RBP11.48□□□□□ -0.57
TRAF3-207ENST00000559734 MMS19Q96T76 1030 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 ZDHHC5Q9C0B5 715 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 NACA2Q9H009 215 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 TM7SF3Q9NS93 570 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 DNAJC17Q9NVM6 304 aaKnown RBP11.48□□□□□ -0.57
TRAF3-207ENST00000559734 CACNA2D2Q9NY47 1150 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 TBC1D7Q9P0N9 293 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 SIX4Q9UIU6 781 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 HCN2Q9UL51 889 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 SSUH2Q9Y2M2 353 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 CEP192Q8TEP8 1941 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 PLXNB3Q9ULL4 1909 aa11.48□□□□□ -0.57
TRAF3-207ENST00000559734 NEDD8-MDP1E9PL57 170 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 HOXC11O43248 304 aaPredicted RBP11.47□□□□□ -0.57
TRAF3-207ENST00000559734 COCHO43405 550 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 CILPO75339 1184 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 CER1O95813 267 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 CD6P30203 668 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 MATKP42679 507 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 NOP14P78316 857 aaKnown RBP11.47□□□□□ -0.57
TRAF3-207ENST00000559734 KCNA1Q09470 495 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 RILPL1Q5EBL4 403 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 DYMQ7RTS9 669 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 GLRX5Q86SX6 157 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 TMEM25Q86YD3 366 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 KBTBD7Q8WVZ9 684 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 SLC39A7Q92504 469 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 OTUB2Q96DC9 234 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 HPDLQ96IR7 371 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 ANKRD36BP1Q96IX9 119 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 MRGPRX1Q96LB2 322 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 CEP295NLQ96MC4 621 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 GPR174Q9BXC1 333 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 SNX25Q9H3E2 840 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 PCIF1Q9H4Z3 704 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 MRPL44Q9H9J2 332 aaKnown RBP11.47□□□□□ -0.57
TRAF3-207ENST00000559734 PDE11AQ9HCR9 933 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 SPHK2Q9NRA0 654 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 BLOC1S4Q9NUP1 217 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRAF3-207ENST00000559734 EXOC7Q9UPT5 735 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 FNDC3AQ9Y2H6 1198 aaKnown RBP11.47□□□□□ -0.57
TRAF3-207ENST00000559734 FREM2Q5SZK8 3169 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 NBEAQ8NFP9 2946 aa11.47□□□□□ -0.57
TRAF3-207ENST00000559734 ITPR1Q14643 2758 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 GCN1Q92616 2671 aaKnown RBP11.46□□□□□ -0.57
TRAF3-207ENST00000559734 NCAM1P13591 858 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 YWHAQP27348 245 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 CACNA2D1P54289 1103 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 TPGS1Q6ZTW0 290 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 ZNF720Q7Z2F6 126 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 CACUL1Q86Y37 369 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 SYCP3Q8IZU3 236 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 GALNT15Q8N3T1 639 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 OR6B3Q8NGW1 331 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 CXorf38Q8TB03 319 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 MYCBPAPQ8TBZ2 947 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 SNX19Q92543 992 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 LARP4BQ92615 738 aaKnown RBP11.46□□□□□ -0.57
TRAF3-207ENST00000559734 HVCN1Q96D96 273 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 TOE1Q96GM8 510 aaKnown RBP11.46□□□□□ -0.57
TRAF3-207ENST00000559734 ZFRQ96KR1 1074 aaKnown RBP11.46□□□□□ -0.57
TRAF3-207ENST00000559734 C8orf48Q96LL4 319 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 ACCSQ96QU6 501 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 CDC6Q99741 560 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 BBS2Q9BXC9 721 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 ZNF518BQ9C0D4 1074 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 TOR4AQ9NXH8 423 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 KIAA1522Q9P206 1035 aaPredicted RBP11.46□□□□□ -0.57
TRAF3-207ENST00000559734 DKK4Q9UBT3 224 aa11.46□□□□□ -0.57
TRAF3-207ENST00000559734 LOC400499M0QZD8 3231 aa11.46□□□□□ -0.58
TRAF3-207ENST00000559734 MYOFQ9NZM1 2061 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 LAMA5O15230 3695 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 SMG1Q96Q15 3661 aaKnown RBP11.45□□□□□ -0.58
TRAF3-207ENST00000559734 A0A087WV48 116 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 WASH3PC4AMC7 463 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 CLDN5O00501 218 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 BCAT2O15382 392 aaPredicted RBP11.45□□□□□ -0.58
TRAF3-207ENST00000559734 FLRT2O43155 660 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 C1QL1O75973 258 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 GCNT3O95395 438 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 LDHAP00338 332 aaKnown RBP11.45□□□□□ -0.58
TRAF3-207ENST00000559734 TNNC2P02585 160 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 CENPBP07199 599 aaPredicted RBP11.45□□□□□ -0.58
TRAF3-207ENST00000559734 WARSP23381 471 aaKnown RBP11.45□□□□□ -0.58
TRAF3-207ENST00000559734 STARD3Q14849 445 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 HLA-BQ31612 363 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 HECTD3Q5T447 861 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 DCAF12L1Q5VU92 463 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 ARL6IP4Q66PJ3 421 aaKnown RBP11.45□□□□□ -0.58
TRAF3-207ENST00000559734 IL27RAQ6UWB1 636 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 DPH6Q7L8W6 267 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 SCUBE3Q8IX30 993 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 NUP93Q8N1F7 819 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 PDZD8Q8NEN9 1154 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 OR5B17Q8NGF7 314 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 BHMTQ93088 406 aa11.45□□□□□ -0.58
TRAF3-207ENST00000559734 WBP2Q969T9 261 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms