RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CST3P01034 146 aaPredicted RBP11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 RBP3P10745 1247 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 FGFR1P11362 822 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 RCN2Q14257 317 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 MTFR1Q15390 333 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 PPM1LQ5SGD2 360 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 SRRM1Q8IYB3 904 aaKnown RBP11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 TPCN2Q8NHX9 752 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 SPATA18Q8TC71 538 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 PRMT1Q99873 361 aaKnown RBP11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 CNPY3Q9BT09 278 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 FZD8Q9H461 694 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 SAYSD1Q9NPB0 183 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 A0A1W2PQ45 241 aaPredicted RBP11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 A0A1W2PQY0 241 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 WDR91A4D1P6 747 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 TTI1O43156 1089 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 MAP3K7O43318 606 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 B4GALT4O60513 344 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 ASS1P00966 412 aaKnown RBP11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 EDNRBP24530 442 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 OR1D2P34982 312 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 KCNMA1Q12791 1236 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 MIIPQ5JXC2 388 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 ITPRIPL1Q6GPH6 555 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 UNC93AQ86WB7 457 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 LRRC43Q8N309 656 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 LRRC52Q8N7C0 313 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 ADAM32Q8TC27 787 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 MINDY3Q9H8M7 445 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 TLR8Q9NR97 1041 aaKnown RBP11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 BFARQ9NZS9 450 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 SLC27A5Q9Y2P5 690 aa11.08□□□□□ -0.64
CARMIL3-202ENST00000559694 EPHB6O15197 1021 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 CXCL14O95715 111 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 BRAFP15056 766 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 WEE1P30291 646 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 PPM1AP35813 382 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 MAPK7Q13164 816 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 CDH18Q13634 790 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 SMAD1Q15797 465 aaKnown RBP11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 TRPM8Q7Z2W7 1104 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 RBM23Q86U06 439 aaKnown RBP11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 IRF2BP1Q8IU81 584 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 PGBD3Q8N328 593 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 ATPAF2Q8N5M1 289 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 MDM1Q8TC05 714 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 HDAC7Q8WUI4 952 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 CATSPERBQ9H7T0 1116 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 CERS4Q9HA82 394 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 STOML1Q9UBI4 398 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 CCDC88AQ3V6T2 1871 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 BCORQ6W2J9 1755 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 RASSF10A6NK89 507 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 H0Y626 953 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 DDX3XO00571 662 aaKnown RBP eCLIP11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 SYF2O95926 243 aaKnown RBP11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 GARSP41250 739 aaKnown RBP11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 ARSEP51690 589 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 ARL4CP56559 192 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 C9orf57Q5W0N0 161 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 NAIF1Q69YI7 327 aaPredicted RBP11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 ANKS3Q6ZW76 656 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 MCOLN2Q8IZK6 566 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 C12orf29Q8N999 325 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 B3GALNT2Q8NCR0 500 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 LRRC37BQ96QE4 947 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 NUDCD1Q96RS6 583 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 ULBP1Q9BZM6 244 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 DYRK4Q9NR20 520 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 SPG21Q9NZD8 308 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 ZMYM2Q9UBW7 1377 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 EXOC1LA0A1B0GW35 172 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 E5RJQ4 531 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 F8VP50 259 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 CLTBP09497 229 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 USP17L7P0C7H9 530 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 KCNJ1P48048 391 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 PSMD5Q16401 504 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 SLC30A9Q6PML9 568 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 KIF2BQ8N4N8 673 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 ATL2Q8NHH9 583 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 PXYLP1Q8TE99 480 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 APBB2Q92870 758 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 IRAK4Q9NWZ3 460 aa11.07□□□□□ -0.64
CARMIL3-202ENST00000559694 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 GOLGA8CPA6NN73 597 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 TCP11X1B4DZS4 312 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 SCTRP47872 440 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 ZNF177Q13360 481 aaPredicted RBP11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 CNGA2Q16280 664 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 SLC10A6Q3KNW5 377 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 FBXO46Q6PJ61 603 aaPredicted RBP11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 SLFN11Q7Z7L1 901 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 OR6P1Q8NGX9 317 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 PPP4R1Q8TF05 950 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 DDI1Q8WTU0 396 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 NOL3O60936 208 aaKnown RBP11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 APRTP07741 180 aa11.06□□□□□ -0.64
CARMIL3-202ENST00000559694 HSPA1AP0DMV8 641 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms