RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 TMEM119Q4V9L6 283 aa3.97□□□□□ -1.77
CASC4-210ENST00000559550 RNASE12Q5GAN4 147 aaKnown RBP3.97□□□□□ -1.77
CASC4-210ENST00000559550 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
CASC4-210ENST00000559550 L1TD1Q5T7N2 865 aaKnown RBP3.97□□□□□ -1.77
CASC4-210ENST00000559550 HIBCHQ6NVY1 386 aaPredicted RBP3.97□□□□□ -1.77
CASC4-210ENST00000559550 ZNF788Q6ZQV5 615 aa3.97□□□□□ -1.77
CASC4-210ENST00000559550 C11orf44Q8N8P7 122 aa3.97□□□□□ -1.77
CASC4-210ENST00000559550 ABHD11Q8NFV4 315 aa3.97□□□□□ -1.77
CASC4-210ENST00000559550 IPCEF1Q8WWN9 437 aaPredicted RBP3.97□□□□□ -1.77
CASC4-210ENST00000559550 DPCDQ9BVM2 203 aaPredicted RBP3.97□□□□□ -1.77
CASC4-210ENST00000559550 MYO1AQ9UBC5 1043 aa3.97□□□□□ -1.77
CASC4-210ENST00000559550 MANSC4A6NHS7 340 aaPredicted RBP3.96□□□□□ -1.78
CASC4-210ENST00000559550 RASA4BC9J798 803 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 EXOC5O00471 708 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 AREL1O15033 823 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 RASA4O43374 803 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 SPRY2O43597 315 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 FGAP02671 866 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 PRKCBP05771 671 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 HARSP12081 509 aaKnown RBP3.96□□□□□ -1.78
CASC4-210ENST00000559550 ATICP31939 592 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 MAPK7Q13164 816 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 FAM209BQ5JX69 171 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 FCRLBQ6BAA4 426 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 CCSAPQ6IQ19 270 aaPredicted RBP3.96□□□□□ -1.78
CASC4-210ENST00000559550 CEP85Q6P2H3 762 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 CRTC1Q6UUV9 634 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 KIRREL2Q6UWL6 708 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 USP49Q70CQ1 688 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 KRT28Q7Z3Y7 464 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 OR2C3Q8N628 320 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 CYP2W1Q8TAV3 490 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 SMCR8Q8TEV9 937 aaPredicted RBP3.96□□□□□ -1.78
CASC4-210ENST00000559550 SCARB1Q8WTV0 552 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 DPF1Q92782 380 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 RIPOR3Q96MK2 946 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 GDF15Q99988 308 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 SELENOOQ9BVL4 669 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 COLEC11Q9BWP8 271 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 HEYLQ9NQ87 328 aaPredicted RBP3.96□□□□□ -1.78
CASC4-210ENST00000559550 STARD7Q9NQZ5 370 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 DNAJB11Q9UBS4 358 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 FRMD4BQ9Y2L6 1034 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 SLC27A6Q9Y2P4 619 aa3.96□□□□□ -1.78
CASC4-210ENST00000559550 SMIM22K7EJ46 135 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 PSMD9O00233 223 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 CES2O00748 559 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 EXOC3O60645 756 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 JTBO76095 146 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 NDST3O95803 873 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 C1RP00736 705 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 HMGB1P09429 215 aaKnown RBP3.95□□□□□ -1.78
CASC4-210ENST00000559550 DLDP09622 509 aaKnown RBP3.95□□□□□ -1.78
CASC4-210ENST00000559550 MCM5P33992 734 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 HTR7P34969 479 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 MTHFSP49914 203 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 COPAP53621 1224 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 FOXF2Q12947 444 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 PICALMQ13492 652 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 TBC1D25Q3MII6 688 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 CLEC9AQ6UXN8 241 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 TRIM72Q6ZMU5 477 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 CATSPERGQ6ZRH7 1159 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 ZNF804AQ7Z570 1209 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 C11orf96Q7Z7L8 435 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 SIRT6Q8N6T7 355 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 TERB1Q8NA31 727 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 NELL1Q92832 810 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 ZC3H10Q96K80 434 aaKnown RBP3.95□□□□□ -1.78
CASC4-210ENST00000559550 FAM227BQ96M60 508 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 CCDC138Q96M89 665 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 HIST1H2AAQ96QV6 131 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 CIPCQ9C0C6 399 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 SLC25A32Q9H2D1 315 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 ASIC5Q9NY37 505 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 AMFRQ9UKV5 643 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 ASAP1Q9ULH1 1129 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 MAN2B2Q9Y2E5 1009 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 KAT6AQ92794 2004 aa3.95□□□□□ -1.78
CASC4-210ENST00000559550 TISP43B9A030 160 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 KCNQ3O43525 872 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 FGF18O76093 207 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 ARP10275 920 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 MYL4P12829 197 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 CREB1P16220 341 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 YY1P25490 414 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 GABRB3P28472 473 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 RBL1P28749 1068 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 DIO1P49895 249 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 AK2P54819 239 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 SUMO2P61956 95 aaKnown RBP3.94□□□□□ -1.78
CASC4-210ENST00000559550 HOXA4Q00056 320 aaPredicted RBP3.94□□□□□ -1.78
CASC4-210ENST00000559550 DEUP1Q05D60 604 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 LMAN2Q12907 356 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 SLC35G1Q2M3R5 365 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 PROSER3Q2NL68 480 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 ARL13BQ3SXY8 428 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 RAP1GAP2Q684P5 730 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 MZT2AQ6P582 158 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 MTHFD1LQ6UB35 978 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms