RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 CCINQ13939 588 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 GSE1Q14687 1217 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 GOLGA7BQ2TAP0 167 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 TMEM196Q5HYL7 178 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 FSTL4Q6MZW2 842 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 TRIM59Q8IWR1 403 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 PPM1KQ8N3J5 372 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 P2RY13Q9BPV8 354 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 LINC00597Q9H2U6 94 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.28□□□□□ -0.28
LRRC28-214ENST00000559433 RIF1Q5UIP0 2472 aaKnown RBP13.27□□□□□ -0.29
LRRC28-214ENST00000559433 TRDMT1O14717 391 aaKnown RBP13.27□□□□□ -0.29
LRRC28-214ENST00000559433 AFPP02771 609 aaKnown RBP13.27□□□□□ -0.29
LRRC28-214ENST00000559433 IRF1P10914 325 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 CD19P15391 556 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 DRD1P21728 446 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 KIF11P52732 1056 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 SLC8A3P57103 927 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 SATB1Q01826 763 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 GAS6Q14393 721 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 SGO2Q562F6 1265 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 ARHGAP17Q68EM7 881 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 NAIF1Q69YI7 327 aaPredicted RBP13.27□□□□□ -0.29
LRRC28-214ENST00000559433 CREBRFQ8IUR6 639 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 UBR7Q8N806 425 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 KIAA1958Q8N8K9 716 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 MLKLQ8NB16 471 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 CCDC26Q8TAB7 109 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 ZFRQ96KR1 1074 aaKnown RBP13.27□□□□□ -0.29
LRRC28-214ENST00000559433 CNOT6LQ96LI5 555 aaKnown RBP13.27□□□□□ -0.29
LRRC28-214ENST00000559433 NUP62CLQ9H1M0 184 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 SH3BP1Q9Y3L3 701 aa13.27□□□□□ -0.29
LRRC28-214ENST00000559433 A0A1W2PQH9 124 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 E2F8A0AVK6 867 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 EGFP01133 1207 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 CYP17A1P05093 508 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 GALK1P51570 392 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 TMEM270Q6UE05 265 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 CLEC17AQ6ZS10 378 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 RRAGAQ7L523 313 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 CCDC186Q7Z3E2 898 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 ANKRD52Q8NB46 1076 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 LMO3Q8TAP4 145 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 RUBCNQ92622 972 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 KAT5Q92993 513 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 CD101Q93033 1021 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 INTS2Q9H0H0 1204 aaKnown RBP13.26□□□□□ -0.29
LRRC28-214ENST00000559433 CYLDQ9NQC7 956 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 OSER1Q9NX31 292 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 TBC1D14Q9P2M4 693 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 NCDNQ9UBB6 729 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 HESX1Q9UBX0 185 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 NAGPAQ9UK23 515 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 TSPAN16Q9UKR8 245 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 SLC8A2Q9UPR5 921 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 PCDHB4Q9Y5E5 795 aa13.26□□□□□ -0.29
LRRC28-214ENST00000559433 TBX18O95935 607 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 ADH1CP00326 375 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 VDRP11473 427 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 RARGP13631 454 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 ATP5C1P36542 298 aaKnown RBP13.25□□□□□ -0.29
LRRC28-214ENST00000559433 BCAT1P54687 386 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 GOLGA8FQ08AF8 430 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 GOLGA8DPQ0D2H9 430 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 DHCR24Q15392 516 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 TPD52L1Q16890 204 aaPredicted RBP13.25□□□□□ -0.29
LRRC28-214ENST00000559433 FBXO43Q4G163 708 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 C10orf120Q5SQS8 335 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 TADA2BQ86TJ2 420 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 PIGZQ86VD9 579 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 TTC30AQ86WT1 665 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 ARHGEF19Q8IW93 802 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 EHBP1Q8NDI1 1231 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 GBP4Q96PP9 640 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 MED15Q96RN5 788 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 UBXN6Q9BZV1 441 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 NMUR1Q9HB89 426 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 FBRSL1Q9HCM7 1045 aaKnown RBP13.25□□□□□ -0.29
LRRC28-214ENST00000559433 LMBRD1Q9NUN5 540 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.25□□□□□ -0.29
LRRC28-214ENST00000559433 KIAA1257Q9ULG3 409 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 USP3Q9Y6I4 520 aa13.25□□□□□ -0.29
LRRC28-214ENST00000559433 FRYLO94915 3013 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 TULP2O00295 520 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 O00370 1275 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 XPO1O14980 1071 aaKnown RBP13.24□□□□□ -0.29
LRRC28-214ENST00000559433 MDM4O15151 490 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 RNF40O75150 1001 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 PAEPP09466 180 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 RALAP11233 206 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 ADH5P11766 374 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 TDGF1P13385 188 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 PSEN1P49768 467 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 TKTL1P51854 596 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 GCNT1Q02742 428 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 PDE4CQ08493 712 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 BST2Q10589 180 aaKnown RBP13.24□□□□□ -0.29
LRRC28-214ENST00000559433 DPCR1Q3MIW9 517 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 RAB41Q5JT25 222 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 HEATR6Q6AI08 1181 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 1066.9 ms