RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 DMC1Q14565 340 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 DCAF17Q5H9S7 520 aaPredicted RBP18.75■□□□□ 0.59
TPM1-218ENST00000559281 BTBD8Q5XKL5 378 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 ANKRD40Q6AI12 368 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 RHBDF2Q6PJF5 856 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 CACNA2D4Q7Z3S7 1137 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 WHAMMQ8TF30 809 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 GAB3Q8WWW8 586 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 PNKPQ96T60 521 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 WDR87Q6ZQQ6 2873 aa18.75■□□□□ 0.59
TPM1-218ENST00000559281 AXIN1O15169 862 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 APBB3O95704 486 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 APODP05090 189 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 ADH5P11766 374 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 PXNP49023 591 aaPredicted RBP18.74■□□□□ 0.59
TPM1-218ENST00000559281 SLC8A3P57103 927 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 SPEM2Q0P670 501 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 RSPO4Q2I0M5 234 aaPredicted RBP18.74■□□□□ 0.59
TPM1-218ENST00000559281 ZNF394Q53GI3 561 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 NUDT18Q6ZVK8 323 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 DGLUCYQ7Z3D6 616 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 TADA2BQ86TJ2 420 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 EZH1Q92800 747 aaPredicted RBP18.74■□□□□ 0.59
TPM1-218ENST00000559281 SEMA4DQ92854 862 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 JAKMIP2Q96AA8 810 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 TMEM176AQ96HP8 235 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 DHTKD1Q96HY7 919 aaPredicted RBP18.74■□□□□ 0.59
TPM1-218ENST00000559281 ZFRQ96KR1 1074 aaKnown RBP18.74■□□□□ 0.59
TPM1-218ENST00000559281 DUSP16Q9BY84 665 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 METTL14Q9HCE5 456 aaKnown RBP18.74■□□□□ 0.59
TPM1-218ENST00000559281 CISHQ9NSE2 258 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 DLL3Q9NYJ7 618 aa18.74■□□□□ 0.59
TPM1-218ENST00000559281 ARMCX3Q9UH62 379 aaPredicted RBP18.74■□□□□ 0.59
TPM1-218ENST00000559281 ZNF638Q14966 1978 aaKnown RBP18.73■□□□□ 0.59
TPM1-218ENST00000559281 K7EQS6 105 aa18.73■□□□□ 0.59
TPM1-218ENST00000559281 SCAMP3O14828 347 aaKnown RBP18.73■□□□□ 0.59
TPM1-218ENST00000559281 PSEN1P49768 467 aa18.73■□□□□ 0.59
TPM1-218ENST00000559281 MRPS21P82921 87 aaKnown RBP18.73■□□□□ 0.59
TPM1-218ENST00000559281 C2orf27AQ580R0 203 aa18.73■□□□□ 0.59
TPM1-218ENST00000559281 LY6G5CQ5SRR4 150 aa18.73■□□□□ 0.59
TPM1-218ENST00000559281 PPP1R26Q5T8A7 1209 aaPredicted RBP18.73■□□□□ 0.59
TPM1-218ENST00000559281 FAM160A2Q8N612 972 aaPredicted RBP18.73■□□□□ 0.59
TPM1-218ENST00000559281 USP33Q8TEY7 942 aa18.73■□□□□ 0.59
TPM1-218ENST00000559281 LOXL4Q96JB6 756 aa18.73■□□□□ 0.59
TPM1-218ENST00000559281 HHIPQ96QV1 700 aa18.73■□□□□ 0.59
TPM1-218ENST00000559281 CYLDQ9NQC7 956 aa18.73■□□□□ 0.59
TPM1-218ENST00000559281 EBF1Q9UH73 591 aa18.73■□□□□ 0.59
TPM1-218ENST00000559281 LSM7Q9UK45 103 aaKnown RBP18.73■□□□□ 0.59
TPM1-218ENST00000559281 OBSL1O75147 1896 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 A0A0A0MRY4 1105 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 HHLA1C9JL84 531 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 KAT7O95251 611 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 TGM1P22735 817 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 GRIA2P42262 883 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 KIF11P52732 1056 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 SEC13P55735 322 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 YWHAEP62258 255 aaKnown RBP18.72■□□□□ 0.59
TPM1-218ENST00000559281 GAB4Q2WGN9 574 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 HSF5Q4G112 596 aaPredicted RBP18.72■□□□□ 0.59
TPM1-218ENST00000559281 KLHDC10Q6PID8 442 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 HTR3DQ70Z44 454 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 ZC3H3Q8IXZ2 948 aaKnown RBP18.72■□□□□ 0.59
TPM1-218ENST00000559281 TSTD1Q8NFU3 115 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 ERCC4Q92889 916 aaPredicted RBP18.72■□□□□ 0.59
TPM1-218ENST00000559281 CDK5RAP1Q96SZ6 601 aaKnown RBP18.72■□□□□ 0.59
TPM1-218ENST00000559281 UBXN6Q9BZV1 441 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 ARHGEF4Q9NR80 690 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 SPHK2Q9NRA0 654 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 DNMT3LQ9UJW3 386 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 CDV3Q9UKY7 258 aaKnown RBP18.72■□□□□ 0.59
TPM1-218ENST00000559281 COQ4Q9Y3A0 265 aa18.72■□□□□ 0.59
TPM1-218ENST00000559281 KIF26AQ9ULI4 1882 aaPredicted RBP18.71■□□□□ 0.59
TPM1-218ENST00000559281 PTPRDP23468 1912 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 TBX18O95935 607 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 IRF1P10914 325 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 RALAP11233 206 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 HOXC13P31276 330 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 TNFRSF4P43489 277 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 PLA2G4AP47712 749 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 SLC6A11P48066 632 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 PMS1P54277 932 aaKnown RBP18.71■□□□□ 0.59
TPM1-218ENST00000559281 CSRP2Q16527 193 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 CBWD6Q4V339 395 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 CBWD3Q5JTY5 395 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 CBWD5Q5RIA9 395 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 GPRIN1Q7Z2K8 1008 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 BBS7Q8IWZ6 715 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 TATDN2Q93075 761 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 CEP63Q96MT8 703 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 KLF16Q9BXK1 252 aaPredicted RBP18.71■□□□□ 0.59
TPM1-218ENST00000559281 PARD6AQ9NPB6 346 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 SEMA4GQ9NTN9 838 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 POLR3BQ9NW08 1133 aaPredicted RBP18.71■□□□□ 0.59
TPM1-218ENST00000559281 DEC1Q9P2X7 70 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 NAGPAQ9UK23 515 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 MMP17Q9ULZ9 603 aa18.71■□□□□ 0.59
TPM1-218ENST00000559281 GREB1Q4ZG55 1949 aa18.7■□□□□ 0.58
TPM1-218ENST00000559281 TBC1D3BA6NDS4 549 aa18.7■□□□□ 0.58
TPM1-218ENST00000559281 CYP26A1O43174 497 aa18.7■□□□□ 0.58
TPM1-218ENST00000559281 HOXC11O43248 304 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms