RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 PTGER3P43115 390 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 RPL6Q02878 288 aaKnown RBP17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 GAD2Q05329 585 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 SEMA3BQ13214 749 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 DUOXA2Q1HG44 320 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 ZNF423Q2M1K9 1284 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 RRAGBQ5VZM2 374 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 STXBP4Q6ZWJ1 553 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 HS2ST1Q7LGA3 356 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 GPD1LQ8N335 351 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 PDILTQ8N807 584 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 PDZD8Q8NEN9 1154 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 MYCBPAPQ8TBZ2 947 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 DHX58Q96C10 678 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 PAGE5Q96GU1 130 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 C8orf48Q96LL4 319 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 STRA6Q9BX79 667 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 SNX25Q9H3E2 840 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 PDE11AQ9HCR9 933 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 OLFML3Q9NRN5 406 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 TBC1D7Q9P0N9 293 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 CFAP97Q9P2B7 532 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 PILRBQ9UKJ0 227 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 ASCC3Q8N3C0 2202 aaKnown RBP17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 AKAP13Q12802 2813 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 GOLGA8IPA6NC78 632 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 ZNF233A6NK53 670 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 GOLGA8JA6NMD2 632 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 ATP2C2O75185 946 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 PRPF6O94906 941 aaKnown RBP17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 SERPINF2P08697 491 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 PDGFRBP09619 1106 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 MBL2P11226 248 aaPredicted RBP17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 IDEP14735 1019 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 SLC6A11P48066 632 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 PSMC1P62191 440 aaKnown RBP17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 DPYDQ12882 1025 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 MORC3Q14149 939 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 MAP7D1Q3KQU3 841 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 HS1BP3Q53T59 392 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 SDE2Q6IQ49 451 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 SARM1Q6SZW1 724 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 PIP4P1Q86T03 277 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 MLKLQ8NB16 471 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 SMARCE1Q969G3 411 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 IKZF4Q9H2S9 585 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 TMEM74BQ9NUR3 256 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 INTS13Q9NVM9 706 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 SMPD4Q9NXE4 827 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 DEC1Q9P2X7 70 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 SIX4Q9UIU6 781 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 SPEGQ15772 3267 aa17.01■□□□□ 0.31
CDC42BPB-203ENST00000558867 PCNX2A6NKB5 2137 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 DSPP15924 2871 aaKnown RBP17■□□□□ 0.31
CDC42BPB-203ENST00000558867 SPAARA0A1B0GVQ0 90 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 E2F8A0AVK6 867 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 ZNF217O75362 1048 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 RTN3O95197 1032 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-203ENST00000558867 FAM163BP0C2L3 166 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 WARSP23381 471 aaKnown RBP17■□□□□ 0.31
CDC42BPB-203ENST00000558867 ITPKAP23677 461 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 LMO2P25791 158 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 GNL1P36915 607 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-203ENST00000558867 KIR2DL1P43626 348 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-203ENST00000558867 WNT7BP56706 349 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 ZXDBP98169 803 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 KDSRQ06136 332 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 RING1Q06587 406 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 KCNA1Q09470 495 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 GAB4Q2WGN9 574 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 DPCR1Q3MIW9 517 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 PEAR1Q5VY43 1037 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-203ENST00000558867 RHBDF2Q6PJF5 856 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 CXorf38Q8TB03 319 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 PCED1BQ96HM7 432 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 GTPBP4Q9BZE4 634 aaKnown RBP17■□□□□ 0.31
CDC42BPB-203ENST00000558867 ELOVL4Q9GZR5 314 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 RNF38Q9H0F5 515 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 PCIF1Q9H4Z3 704 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 KIAA1586Q9HCI6 787 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 KBTBD4Q9NVX7 518 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 DACH1Q9UI36 760 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 MBD1Q9UIS9 605 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-203ENST00000558867 SH3BP1Q9Y3L3 701 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 PCDHB9Q9Y5E1 797 aa17■□□□□ 0.31
CDC42BPB-203ENST00000558867 PI4KAP42356 2102 aa16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 SMTNL1A8MU46 457 aa16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 F8VP50 259 aa16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 OLFM2O95897 454 aa16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 HNRNPLP14866 589 aaKnown RBP eCLIP16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 STAT6P42226 847 aa16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 USP46P62068 366 aa16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 TAF10Q12962 218 aa16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 SLC14A1Q13336 389 aa16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 CCDC142Q17RM4 750 aa16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 MDH1BQ5I0G3 518 aa16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 LUZP1Q86V48 1076 aa16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 DHX40Q8IX18 779 aaKnown RBP16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 ZNF513Q8N8E2 541 aaPredicted RBP16.99■□□□□ 0.31
CDC42BPB-203ENST00000558867 KBTBD7Q8WVZ9 684 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms