RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 FASTKD5Q7L8L6 764 aaKnown RBP16.05■□□□□ 0.16
AP4E1-202ENST00000558439 NDE1Q9NXR1 346 aa16.05■□□□□ 0.16
AP4E1-202ENST00000558439 H3BRB1 525 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 FAM155BO75949 473 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 ERBB2P04626 1255 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 CYP2C8P10632 490 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 ARL2P36404 184 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 DEUP1Q05D60 604 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 STILQ15468 1287 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 SWT1Q5T5J6 900 aaKnown RBP16.04■□□□□ 0.16
AP4E1-202ENST00000558439 DPY19L2P1Q6NXN4 242 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 C16orf46Q6P387 395 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 SLC16A10Q8TF71 515 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 EXT2Q93063 718 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 KLRG1Q96E93 195 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 ATXN2Q99700 1313 aaKnown RBP16.04■□□□□ 0.16
AP4E1-202ENST00000558439 TUT1Q9H6E5 874 aaKnown RBP16.04■□□□□ 0.16
AP4E1-202ENST00000558439 ATP8B3O60423 1300 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 FAM237BA0A1B0GVD1 139 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 TTLL13PA6NNM8 815 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 M0QYT0 321 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 SMAPO00193 183 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 CETPP11597 493 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 CYP2C9P11712 490 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 ANKRD13AQ8IZ07 590 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 SLC25A41Q8N5S1 370 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 TNIP3Q96KP6 325 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 FCHO1O14526 889 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 TPI1P60174 286 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 LAMC2Q13753 1193 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 KCNT2Q6UVM3 1135 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 CPT1BQ92523 772 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 MECRQ9BV79 373 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 STARD13Q9Y3M8 1113 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 AFG3L2Q9Y4W6 797 aa16.04■□□□□ 0.16
AP4E1-202ENST00000558439 KCNK1O00180 336 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 TM9SF1O15321 606 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 FAM183BPQ6ZVS7 135 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 TAS1R3Q7RTX0 852 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 TMEM192Q8IY95 271 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 RAB3IL1Q8TBN0 382 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 TFB1MQ8WVM0 346 aaKnown RBP16.03■□□□□ 0.16
AP4E1-202ENST00000558439 SYT11Q9BT88 431 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 B3GNT5Q9BYG0 378 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 CPSF2Q9P2I0 782 aaKnown RBP16.03■□□□□ 0.16
AP4E1-202ENST00000558439 GRID1Q9ULK0 1009 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 ACTL7BQ9Y614 415 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.03■□□□□ 0.16
AP4E1-202ENST00000558439 USP12O75317 370 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 ABHD2P08910 425 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 KCNA4P22459 653 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 ACAT1P24752 427 aaKnown RBP16.03■□□□□ 0.16
AP4E1-202ENST00000558439 ART3Q13508 389 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 ANKRD20A2Q5SQ80 823 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 SH3PXD2AQ5TCZ1 1133 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 ANKRD20A1Q5TYW2 823 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 C7orf43Q8WVR3 580 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 NAF1Q96HR8 494 aaKnown RBP16.03■□□□□ 0.16
AP4E1-202ENST00000558439 UBP1Q9NZI7 540 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 DLGAP2Q9P1A6 1054 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 TCRBV9S1A1TA0A576 114 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 EDF1O60869 148 aaKnown RBP16.03■□□□□ 0.16
AP4E1-202ENST00000558439 TRUB2O95900 331 aaKnown RBP16.03■□□□□ 0.16
AP4E1-202ENST00000558439 CTSHP09668 335 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 ABCG1P45844 678 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 OGDHQ02218 1023 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 HIC1Q14526 733 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 PDK2Q15119 407 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 RPS6KA2Q15349 733 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 ADAM32Q8TC27 787 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 STRA6Q9BX79 667 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 NACA2Q9H009 215 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 AAASQ9NRG9 546 aa16.03■□□□□ 0.16
AP4E1-202ENST00000558439 MAFBQ9Y5Q3 323 aaPredicted RBP16.03■□□□□ 0.16
AP4E1-202ENST00000558439 DFFAO00273 331 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 EEF2KO00418 725 aaKnown RBP16.02■□□□□ 0.16
AP4E1-202ENST00000558439 TRPA1O75762 1119 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 ARPP19P56211 112 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 CACNB2Q08289 660 aaPredicted RBP16.02■□□□□ 0.16
AP4E1-202ENST00000558439 RNF43Q68DV7 783 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 TMEM154Q6P9G4 183 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 SCN4BQ8IWT1 228 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 TEX9Q8N6V9 391 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 TSC22D3Q99576 134 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 ACSS3Q9H6R3 686 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 CYP3A43Q9HB55 503 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.02■□□□□ 0.16
AP4E1-202ENST00000558439 PPP1R12AO14974 1030 aaPredicted RBP16.02■□□□□ 0.16
AP4E1-202ENST00000558439 PMM2O15305 246 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 AP2B1P63010 937 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 KLC1Q07866 573 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 BNIP1Q12981 228 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 ERO1BQ86YB8 467 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 POU5F2Q8N7G0 328 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 BTBD7Q9P203 1132 aa16.02■□□□□ 0.16
AP4E1-202ENST00000558439 CELF3Q5SZQ8 465 aaKnown RBP16.02■□□□□ 0.15
AP4E1-202ENST00000558439 RNASEH2BQ5TBB1 312 aaKnown RBP16.02■□□□□ 0.15
AP4E1-202ENST00000558439 AFAP1L2Q8N4X5 818 aa16.02■□□□□ 0.15
AP4E1-202ENST00000558439 ZNF560Q96MR9 790 aa16.02■□□□□ 0.15
AP4E1-202ENST00000558439 FRMD8P1Q9BZ68 369 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms