RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 LINC00597Q9H2U6 94 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 FAM207AQ9NSI2 230 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 DUS2Q9NX74 493 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 HSPBP1Q9NZL4 362 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 WASF3Q9UPY6 502 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 EPB41P11171 864 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 SPINK2P20155 84 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 ACAT1P24752 427 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 DGKEP52429 567 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 GSDMDP57764 484 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 TSPY1Q01534 308 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 ALCAMQ13740 583 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 EML3Q32P44 896 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 SV2CQ496J9 727 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 FKBP15Q5T1M5 1219 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 OSTM1Q86WC4 334 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 CBWD2Q8IUF1 395 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 PDCL2Q8N4E4 241 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 TTC16Q8NEE8 873 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 OSCP1Q8WVF1 389 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 TRPC7Q9HCX4 862 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 GCNT4Q9P109 453 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 L1RE1Q9UN81 338 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 FRMD4BQ9Y2L6 1034 aa11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 HELZP42694 1942 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-204ENST00000558376 A0A1W2PQC6 194 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 LNP1A1A4G5 178 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 AKR1B15C9JRZ8 316 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 HCRTO43612 131 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 TRIM49P0CI25 452 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 TRIM49CP0CI26 452 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 BCKDHBP21953 392 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 MSNP26038 577 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 USP4Q13107 963 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 NFIL3Q16649 462 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 SLFN12LQ6IEE8 588 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 PLEKHO2Q8TD55 490 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 POMGNT1Q8WZA1 660 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 SLC35C1Q96A29 364 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 MYRFLQ96LU7 910 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 TMEM121BQ9BXQ6 578 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 GTF3C4Q9UKN8 822 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 ZMIZ1Q9ULJ6 1067 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 EXOC7Q9UPT5 735 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 SIK3Q9Y2K2 1263 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 PKD1L2Q7Z442 2459 aa11.88□□□□□ -0.51
RABGGTA-204ENST00000558376 PATE3B3GLJ2 98 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 CDX4O14627 284 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 SLC16A3O15427 465 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 USP17L7P0C7H9 530 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 SLC9A1P19634 815 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 POLR2BP30876 1174 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 GBP1P32455 592 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 IFNAR2P48551 515 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 POU5F1Q01860 360 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 FOXC1Q12948 553 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 NFE2Q16621 373 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 GAB4Q2WGN9 574 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 INTS6LQ5JSJ4 861 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 SH3PXD2AQ5TCZ1 1133 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 PMS2CLQ68D20 193 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 UNQ6494/PRO21346Q6UXR6 183 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 SLC9A9Q8IVB4 645 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 ARL14EPQ8N8R7 260 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 XXYLT1Q8NBI6 393 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 CXorf38Q8TB03 319 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 GOLGA5Q8TBA6 731 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 KIAA1524Q8TCG1 905 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 USP33Q8TEY7 942 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 TRMT2BQ96GJ1 504 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 ERGIC2Q96RQ1 377 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 ACBD6Q9BR61 282 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 TPSD1Q9BZJ3 242 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 DDX43Q9NXZ2 648 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 AGAP1Q9UPQ3 857 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 FASNP49327 2511 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 ITIH6Q6UXX5 1313 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 TRAV19A0A0A6YYK7 116 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 C2orf78A6NCI8 922 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 K7EQS6 105 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 HNRNPLP14866 589 aaKnown RBP eCLIP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 TRIM21P19474 475 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 KRT9P35527 623 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 OPRD1P41143 372 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 RPL10AP62906 217 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 ZXDBP98169 803 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 ZNF252P-AS1Q0IIN9 211 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 TMEM139Q8IV31 216 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 C1orf127Q8N9H9 656 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 KDF1Q8NAX2 398 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 CCDC150Q8NCX0 1101 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 TSTD1Q8NFU3 115 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 SH3RF2Q8TEC5 729 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 ATP2A3Q93084 1043 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 ACDQ96AP0 544 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 CCDC127Q96BQ5 260 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 ZNF560Q96MR9 790 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 FAM213AQ9BRX8 229 aa11.87□□□□□ -0.51
RABGGTA-204ENST00000558376 METTL14Q9HCE5 456 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms