RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 CLIC5Q9NZA1 410 aa12.65□□□□□ -0.38
CDK12-203ENST00000558240 ARHGAP26Q9UNA1 814 aa12.65□□□□□ -0.38
CDK12-203ENST00000558240 CEP83Q9Y592 693 aa12.65□□□□□ -0.38
CDK12-203ENST00000558240 F5P12259 2224 aa12.65□□□□□ -0.38
CDK12-203ENST00000558240 TICRRQ7Z2Z1 1910 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 A0A1W2PQH9 124 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 CBFA2T2O43439 604 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 TLR5O60602 858 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 GABBR2O75899 941 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 FBXO21O94952 628 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 LCP1P13796 627 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 PGFP49763 221 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 RGS7P49802 495 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 FCHO2Q0JRZ9 810 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 SCD5Q86SK9 330 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 TADA2BQ86TJ2 420 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 TMEM110Q86TL2 294 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 NOP9Q86U38 636 aaKnown RBP12.64□□□□□ -0.39
CDK12-203ENST00000558240 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 WDTC1Q8N5D0 677 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 KIAA1958Q8N8K9 716 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 BPIFB1Q8TDL5 484 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 BAP1Q92560 729 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 RSPRY1Q96DX4 576 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 IQCDQ96DY2 449 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 LRRC3BQ96PB8 259 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 NOX5Q96PH1 765 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 CDK5RAP1Q96SZ6 601 aaKnown RBP12.64□□□□□ -0.39
CDK12-203ENST00000558240 XPO4Q9C0E2 1151 aaKnown RBP12.64□□□□□ -0.39
CDK12-203ENST00000558240 TTYH3Q9C0H2 523 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 CCSER2Q9H7U1 834 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 NMUR1Q9HB89 426 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 OSER1Q9NX31 292 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 NAGPAQ9UK23 515 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 CCL26Q9Y258 94 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 MYOFQ9NZM1 2061 aa12.64□□□□□ -0.39
CDK12-203ENST00000558240 CHADO15335 359 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 SART1O43290 800 aaKnown RBP12.63□□□□□ -0.39
CDK12-203ENST00000558240 COCHO43405 550 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 NARSO43776 548 aaKnown RBP12.63□□□□□ -0.39
CDK12-203ENST00000558240 MBL2P11226 248 aaPredicted RBP12.63□□□□□ -0.39
CDK12-203ENST00000558240 RALAP11233 206 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 RARGP13631 454 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 FERP16591 822 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 CDH5P33151 784 aaPredicted RBP12.63□□□□□ -0.39
CDK12-203ENST00000558240 ATP5C1P36542 298 aaKnown RBP12.63□□□□□ -0.39
CDK12-203ENST00000558240 SNX16P57768 344 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 DAOAP59103 153 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 YWHAGP61981 247 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDK12-203ENST00000558240 GPC5P78333 572 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 PFKPQ01813 784 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 CDR2Q01850 454 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 PDCLQ13371 301 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 BHLHA9Q7RTU4 235 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 YAF2Q8IY57 180 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 TMEM35BQ8NCS4 154 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 IRF7Q92985 503 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 PPP1R13BQ96KQ4 1090 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 SMG9Q9H0W8 520 aaKnown RBP12.63□□□□□ -0.39
CDK12-203ENST00000558240 PDCL3Q9H2J4 239 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 SMOC2Q9H3U7 446 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 EPHX3Q9H6B9 360 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 BRD9Q9H8M2 597 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 TRPV5Q9NQA5 729 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 ST7Q9NRC1 585 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDK12-203ENST00000558240 THG1LQ9NWX6 298 aaKnown RBP12.63□□□□□ -0.39
CDK12-203ENST00000558240 WNT16Q9UBV4 365 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 CYTH4Q9UIA0 394 aa12.63□□□□□ -0.39
CDK12-203ENST00000558240 NOCTQ9UK39 431 aaKnown RBP12.63□□□□□ -0.39
CDK12-203ENST00000558240 ITIH6Q6UXX5 1313 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 A0A1W2PQJ5 194 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 ZNF263O14978 683 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 LSM8O95777 96 aaKnown RBP12.62□□□□□ -0.39
CDK12-203ENST00000558240 MMEP08473 750 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 GDI1P31150 447 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 ZXDBP98169 803 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 PLCB2Q00722 1185 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 SIGLEC14Q08ET2 396 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 GRM2Q14416 872 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 ZNF77Q15935 545 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 TAF3Q5VWG9 929 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 BTBD8Q5XKL5 378 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 SARM1Q6SZW1 724 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 TRIM67Q6ZTA4 783 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 IRF2BP2Q7Z5L9 587 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 DDX42Q86XP3 938 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDK12-203ENST00000558240 PASD1Q8IV76 773 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 SCUBE3Q8IX30 993 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 SH3RF2Q8TEC5 729 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 NDRG1Q92597 394 aaKnown RBP12.62□□□□□ -0.39
CDK12-203ENST00000558240 DNASE1L2Q92874 299 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 NACA2Q9H009 215 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 NUCKS1Q9H1E3 243 aaKnown RBP12.62□□□□□ -0.39
CDK12-203ENST00000558240 ABCC13Q9NSE7 274 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 AIPL1Q9NZN9 384 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 DNMT3LQ9UJW3 386 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 CPQQ9Y646 472 aa12.62□□□□□ -0.39
CDK12-203ENST00000558240 YJEFN3A6XGL0 299 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms