RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 PCDHB5Q9Y5E4 795 aa12.08□□□□□ -0.48
RORA-207ENST00000558234 TRIOBPQ9H2D6 2365 aa12.08□□□□□ -0.48
RORA-207ENST00000558234 TCP1P17987 556 aaKnown RBP12.08□□□□□ -0.48
RORA-207ENST00000558234 DLX2Q07687 328 aaPredicted RBP12.08□□□□□ -0.48
RORA-207ENST00000558234 ARCQ7LC44 396 aa12.08□□□□□ -0.48
RORA-207ENST00000558234 TMC7Q7Z402 723 aa12.08□□□□□ -0.48
RORA-207ENST00000558234 ALG6Q9Y672 507 aa12.08□□□□□ -0.48
RORA-207ENST00000558234 FTCDO95954 541 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 KRT5P13647 590 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 PGFP49763 221 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 SGO2Q562F6 1265 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 BEND5Q7L4P6 421 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 XYLT1Q86Y38 959 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 ATAD1Q8NBU5 361 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 SMRP1Q8NCR6 262 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 KCNK16Q96T55 309 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 MAN1C1Q9NR34 630 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 DZANK1Q9NVP4 752 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 RNF14Q9UBS8 474 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 PCDHA3Q9Y5H8 950 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 SCNN1AP37088 669 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 USP46P62068 366 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 BST2Q10589 180 aaKnown RBP12.07□□□□□ -0.48
RORA-207ENST00000558234 TAZQ16635 292 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 GOLGA7BQ2TAP0 167 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 PMF1Q6P1K2 205 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 C4orf50Q6ZRC1 276 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 ALS2CR12Q96Q35 445 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 NUP85Q9BW27 656 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 TMCO5BA8MYB1 307 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 TRIM66O15016 1216 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 NRIP1P48552 1158 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 BCAT1P54687 386 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 TSPY1Q01534 308 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 NAA35Q5VZE5 725 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 CEP112Q8N8E3 955 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 OVCA2Q8WZ82 227 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 SEC14L1Q92503 715 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 CPXM1Q96SM3 734 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 ZNF334Q9HCZ1 680 aaPredicted RBP12.07□□□□□ -0.48
RORA-207ENST00000558234 EHD2Q9NZN4 543 aa12.07□□□□□ -0.48
RORA-207ENST00000558234 C3orf70A6NLC5 250 aaPredicted RBP12.06□□□□□ -0.48
RORA-207ENST00000558234 C2CD2LO14523 706 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 GLUD1P00367 558 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 IGLV3-25P01717 112 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 FYNP06241 537 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 ERCC6LQ2NKX8 1250 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 OTUD1Q5VV17 481 aaPredicted RBP12.06□□□□□ -0.48
RORA-207ENST00000558234 ANKS1BQ7Z6G8 1248 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 KREMEN2Q8NCW0 462 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 MYLIPQ8WY64 445 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 CTNNBL1Q8WYA6 563 aaPredicted RBP12.06□□□□□ -0.48
RORA-207ENST00000558234 TRIM11Q96F44 468 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 KRT82Q9NSB4 513 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 CHORDC1Q9UHD1 332 aaPredicted RBP12.06□□□□□ -0.48
RORA-207ENST00000558234 DOCK4Q8N1I0 1966 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 SOBPA7XYQ1 873 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 F11P03951 625 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 ERBB2P04626 1255 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 OLFML1Q6UWY5 402 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 SYCE1Q8N0S2 351 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 ZNF564Q8TBZ8 553 aaPredicted RBP12.06□□□□□ -0.48
RORA-207ENST00000558234 FNIP1Q8TF40 1166 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 NT5C3BQ969T7 300 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 FAM49BQ9NUQ9 324 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 PER2O15055 1255 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 ABCB4P21439 1286 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 MARCKSL1P49006 195 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 PDE4CQ08493 712 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 DUSP4Q13115 394 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 ZNF394Q53GI3 561 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 WDR93Q6P2C0 686 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 C3orf20Q8ND61 904 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 KRT35Q92764 455 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 CASP10Q92851 521 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 MS4A14Q96JA4 679 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 BTBD6Q96KE9 485 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 CARD9Q9H257 536 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 DMAP1Q9NPF5 467 aaPredicted RBP12.06□□□□□ -0.48
RORA-207ENST00000558234 ZNF446Q9NWS9 450 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 SCML2Q9UQR0 700 aa12.06□□□□□ -0.48
RORA-207ENST00000558234 BDNFP23560 247 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 CCR2P41597 374 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 PDCLQ13371 301 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 IFI16Q16666 785 aaKnown RBP12.05□□□□□ -0.48
RORA-207ENST00000558234 GPR149Q86SP6 731 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 C1orf131Q8NDD1 294 aaKnown RBP12.05□□□□□ -0.48
RORA-207ENST00000558234 RPGRIP1Q96KN7 1286 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 HSFY1Q96LI6 401 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 PRKD2Q9BZL6 878 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 SFXN1Q9H9B4 322 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 OSER1Q9NX31 292 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 ASB3Q9Y575 518 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 THAP12O43422 761 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 SOAT2O75908 522 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 KLF1Q13351 362 aaPredicted RBP12.05□□□□□ -0.48
RORA-207ENST00000558234 CYP1B1Q16678 543 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 SCD5Q86SK9 330 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 DEFB123Q8N688 67 aa12.05□□□□□ -0.48
RORA-207ENST00000558234 SPATA4Q8NEY3 305 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms