RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 RHOT2Q8IXI1 618 aa7.04□□□□□ -1.28
RTF1-204ENST00000558117 AMER2Q8N7J2 671 aa7.04□□□□□ -1.28
RTF1-204ENST00000558117 LARP4BQ92615 738 aaKnown RBP7.04□□□□□ -1.28
RTF1-204ENST00000558117 ATOH1Q92858 354 aaPredicted RBP7.04□□□□□ -1.28
RTF1-204ENST00000558117 MVB12AQ96EY5 273 aa7.04□□□□□ -1.28
RTF1-204ENST00000558117 MYEOVQ96EZ4 313 aa7.04□□□□□ -1.28
RTF1-204ENST00000558117 LRGUKQ96M69 825 aa7.04□□□□□ -1.28
RTF1-204ENST00000558117 MRIQ9BWK5 157 aa7.04□□□□□ -1.28
RTF1-204ENST00000558117 TRMT112Q9UI30 125 aaKnown RBP7.04□□□□□ -1.28
RTF1-204ENST00000558117 RRP7AQ9Y3A4 280 aaKnown RBP7.04□□□□□ -1.28
RTF1-204ENST00000558117 PCDHA3Q9Y5H8 950 aa7.04□□□□□ -1.28
RTF1-204ENST00000558117 FPGT-TNNI3KV9GXZ4 949 aa7.04□□□□□ -1.28
RTF1-204ENST00000558117 RPAP1Q9BWH6 1393 aaPredicted RBP7.04□□□□□ -1.28
RTF1-204ENST00000558117 BPTFQ12830 3046 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 ASPMQ8IZT6 3477 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 PLXNA1Q9UIW2 1896 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 CCDC78A2IDD5 438 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 AP1G1O43747 822 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 DTNBO60941 627 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 SCGB1D2O95969 90 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 CD1AP06126 327 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 CYP2C19P33261 490 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 MAP2K6P52564 334 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 FPGSQ05932 587 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 RAB30Q15771 203 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 FLYWCH1Q4VC44 716 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 PABPC1LQ4VXU2 614 aaKnown RBP7.03□□□□□ -1.28
RTF1-204ENST00000558117 AGAP9Q5VTM2 703 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 TSHZ3Q63HK5 1081 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 RHOUQ7L0Q8 258 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 GRAMD1CQ8IYS0 662 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 CERS5Q8N5B7 392 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 C3orf20Q8ND61 904 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 OR56A1Q8NGH5 318 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 TMEM39BQ9GZU3 492 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 RNPEPQ9H4A4 650 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 SLC28A3Q9HAS3 691 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 ANLNQ9NQW6 1124 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 KLHL42Q9P2K6 505 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 MED23Q9ULK4 1368 aa7.03□□□□□ -1.28
RTF1-204ENST00000558117 CDHR4A6H8M9 788 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 TMEM191CA6NGB0 347 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 DNM1LO00429 736 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 KIAA0355O15063 1070 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 FTLP02792 175 aaPredicted RBP7.02□□□□□ -1.29
RTF1-204ENST00000558117 MYL6BP14649 208 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 LPOP22079 712 aaPredicted RBP7.02□□□□□ -1.29
RTF1-204ENST00000558117 NOMO3P69849 1222 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 TNFAIP1Q13829 316 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 PPP2R5AQ15172 486 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 BEAN1Q3B7T3 259 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 SPDYE7PQ495Y7 208 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 NOMO2Q5JPE7 1267 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 B3GNT9Q6UX72 402 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 EPM2AIP1Q7L775 607 aaPredicted RBP7.02□□□□□ -1.29
RTF1-204ENST00000558117 CHPFQ8IZ52 775 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 FITM2Q8N6M3 262 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 CPEB3Q8NE35 698 aaKnown RBP7.02□□□□□ -1.29
RTF1-204ENST00000558117 IL17RDQ8NFM7 739 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 NLGN4YQ8NFZ3 816 aaPredicted RBP7.02□□□□□ -1.29
RTF1-204ENST00000558117 RGMAQ96B86 450 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 COA1Q9GZY4 146 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 KLHL11Q9NVR0 708 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 SLC45A2Q9UMX9 530 aa7.02□□□□□ -1.29
RTF1-204ENST00000558117 A0A0G2JMZ2 1700 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 NT5C1B-RDH14C9J2C7 533 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 F2RL2O00254 374 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 MARCH6O60337 910 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 OFD1O75665 1012 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 ALDH2P05091 517 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 MTHFD1P11586 935 aaKnown RBP7.01□□□□□ -1.29
RTF1-204ENST00000558117 IL9P15248 144 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 CYP2B6P20813 491 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 GCSHP23434 173 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 DDX6P26196 483 aaKnown RBP eCLIP7.01□□□□□ -1.29
RTF1-204ENST00000558117 HK3P52790 923 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 TLE2Q04725 743 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 ARMC6Q6NXE6 501 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 FOXR2Q6PJQ5 311 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 SLC4A10Q6U841 1118 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 ANKRD13CQ8N6S4 541 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.01□□□□□ -1.29
RTF1-204ENST00000558117 TBC1D15Q8TC07 691 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 TSR2Q969E8 191 aaKnown RBP7.01□□□□□ -1.29
RTF1-204ENST00000558117 AIFM3Q96NN9 605 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 MAP3K14Q99558 947 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 ZSWIM1Q9BR11 485 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 MLST8Q9BVC4 326 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 MAN1C1Q9NR34 630 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 ZNF70Q9UC06 446 aaPredicted RBP7.01□□□□□ -1.29
RTF1-204ENST00000558117 MAP3K2Q9Y2U5 619 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 NOX1Q9Y5S8 564 aa7.01□□□□□ -1.29
RTF1-204ENST00000558117 CENPVL1A0A0U1RR11 272 aa7□□□□□ -1.29
RTF1-204ENST00000558117 HAUS5O94927 633 aa7□□□□□ -1.29
RTF1-204ENST00000558117 ELANEP08246 267 aa7□□□□□ -1.29
RTF1-204ENST00000558117 CKBP12277 381 aa7□□□□□ -1.29
RTF1-204ENST00000558117 BMPR1AP36894 532 aa7□□□□□ -1.29
RTF1-204ENST00000558117 INHBCP55103 352 aa7□□□□□ -1.29
RTF1-204ENST00000558117 GUCY1B3Q02153 619 aa7□□□□□ -1.29
RTF1-204ENST00000558117 FAM110CQ1W6H9 321 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms