RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 FBRSL1Q9HCM7 1045 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 CISHQ9NSE2 258 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 C2orf42Q9NWW7 574 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 GMIPQ9P107 970 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 CPQQ9Y646 472 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 COCHO43405 550 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 MBL2P11226 248 aaPredicted RBP9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 FMO5P49326 533 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 TUBP50607 506 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 GALK1P51570 392 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 STX17P56962 302 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 FOXK1P85037 733 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 SATB1Q01826 763 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 CAMK4Q16566 473 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 GAB4Q2WGN9 574 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 ZNF394Q53GI3 561 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 HECTD3Q5T447 861 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 NAIF1Q69YI7 327 aaPredicted RBP9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 ZC3H14Q6PJT7 736 aaKnown RBP9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 GPRIN1Q7Z2K8 1008 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 SYNPOQ8N3V7 929 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 SPEM1Q8N4L4 309 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 CPA6Q8N4T0 437 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 TTC39CQ8N584 583 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 UBR7Q8N806 425 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 ZBTB44Q8NCP5 570 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 ATP2A3Q93084 1043 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 TMEM176AQ96HP8 235 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 ZFRQ96KR1 1074 aaKnown RBP9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 HEXIM2Q96MH2 286 aaKnown RBP9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 DUSP16Q9BY84 665 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 FBXO44Q9H4M3 255 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 CCSER2Q9H7U1 834 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 ZSCAN32Q9NX65 697 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 SMPD4Q9NXE4 827 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 KIAA1468Q9P260 1216 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 CTNND2Q9UQB3 1225 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 SCML2Q9UQR0 700 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 KIAA1549LQ6ZVL6 1849 aa9.28□□□□□ -0.92
SNRPA1-206ENST00000558059 RALGAPA1Q6GYQ0 2036 aa9.27□□□□□ -0.92
SNRPA1-206ENST00000558059 BICDL2A1A5D9 508 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 K7ESF4 209 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 SCAMP3O14828 347 aaKnown RBP9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 LILRB5O75023 590 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 PAPSS2O95340 614 aaPredicted RBP9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 EGFP01133 1207 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 LMNAP02545 664 aaKnown RBP9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 TRIM21P19474 475 aaKnown RBP9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 HOXC13P31276 330 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 CXCL12P48061 93 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 CCR3P51677 355 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 KIF11P52732 1056 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 AMPD2Q01433 879 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 PAK1Q13153 545 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 CUL2Q13617 745 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 CCDC40Q4G0X9 1142 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 ARHGAP17Q68EM7 881 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 PKN3Q6P5Z2 889 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 TRIM59Q8IWR1 403 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 ADGRG2Q8IZP9 1017 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 TRIML1Q8N9V2 468 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 SUMF1Q8NBK3 374 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 LMO3Q8TAP4 145 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 EZH1Q92800 747 aaPredicted RBP9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 WBP2Q969T9 261 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 JAKMIP2Q96AA8 810 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 MED15Q96RN5 788 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 SRRTQ9BXP5 876 aaKnown RBP9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 FAM126AQ9BYI3 521 aaPredicted RBP9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 NMUR1Q9HB89 426 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 PNPLA8Q9NP80 782 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 TLR8Q9NR97 1041 aaKnown RBP9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 OSER1Q9NX31 292 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 CFAP97Q9P2B7 532 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 PCDHGA2Q9Y5H1 932 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 USP3Q9Y6I4 520 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 GON4LQ3T8J9 2241 aa9.27□□□□□ -0.93
SNRPA1-206ENST00000558059 EML5Q05BV3 1969 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 E2F8A0AVK6 867 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 SLC9A3R1O14745 358 aaPredicted RBP9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 P4HA2O15460 535 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 CYP26A1O43174 497 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 TLR5O60602 858 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 NFATC1O95644 943 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 TBX18O95935 607 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 CYP17A1P05093 508 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 ACO1P21399 889 aaKnown RBP9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 DRD1P21728 446 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 OPRD1P41143 372 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 NRLP54845 237 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 MARSP56192 900 aaKnown RBP9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 DMWDQ09019 674 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 GRSF1Q12849 480 aaKnown RBP eCLIP9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 LRMPQ12912 555 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 NR1H3Q13133 447 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 DHCR24Q15392 516 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 RHBDF2Q6PJF5 856 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 SCD5Q86SK9 330 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 TTC30AQ86WT1 665 aa9.26□□□□□ -0.93
SNRPA1-206ENST00000558059 DDX42Q86XP3 938 aaKnown RBP eCLIP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms