RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 DUOXA2Q1HG44 320 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 SYCP2LQ5T4T6 812 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 TMCO4Q5TGY1 634 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 KYAT3Q6YP21 454 aaKnown RBP12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 CLPTM1LQ96KA5 538 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 RILPQ96NA2 401 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 SLC13A1Q9BZW2 595 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 PAK5Q9P286 719 aa12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 ZC3H7BQ9UGR2 993 aaKnown RBP12.29□□□□□ -0.44
VIPAS39-211ENST00000557658 CCDC195A0A1B0GUA6 201 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 H7C0C1 242 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 KRT38O76015 456 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 TRUB2O95900 331 aaKnown RBP12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 C1QAP02745 245 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 OATP04181 439 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 SERPINA6P08185 405 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 ZCCHC18P0CG32 403 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 KITP10721 976 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 TNFSF9P41273 254 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 ATP5OP48047 213 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 ALDH18A1P54886 795 aaKnown RBP12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 YWHAZP63104 245 aaKnown RBP12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 MRPS5P82675 430 aaKnown RBP12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 TFDP2Q14188 446 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 ACAP1Q15027 740 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 ZNF699Q32M78 642 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 TEX44Q53QW1 395 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 SMYD5Q6GMV2 418 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 NPNTQ6UXI9 565 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 PPP2R3CQ969Q6 453 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 GMLQ99445 158 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 TCHPQ9BT92 498 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 RAB6BQ9NRW1 208 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 TJP2Q9UDY2 1190 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 USP18Q9UMW8 372 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 DCAF8L1A6NGE4 600 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 RFPL1O75677 317 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 RAD17O75943 681 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 OSBPP22059 807 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 PRKCHP24723 683 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 WASHC5Q12768 1159 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 SURF1Q15526 300 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 TAF5Q15542 800 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 FAM47CQ5HY64 1035 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 AAGABQ6PD74 315 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 ZPBP2Q6X784 338 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 ZBTB33Q86T24 672 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 ZNF302Q9NR11 478 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 IL1RAPL1Q9NZN1 696 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 MARCOQ9UEW3 520 aaPredicted RBP12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 CYTH4Q9UIA0 394 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 SORCS3Q9UPU3 1222 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 HBS1LQ9Y450 684 aaKnown RBP12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 RIPK3Q9Y572 518 aa12.28□□□□□ -0.44
VIPAS39-211ENST00000557658 CXorf49A8MYA2 514 aaPredicted RBP12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 PRR5-ARHGAP8B1AHC4 643 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 VWA5AO00534 786 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 BIRC5O15392 142 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 SNNO75324 88 aaPredicted RBP12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 CHRNA5P30532 468 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 ARHGAP8P85298 464 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 CDC16Q13042 620 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 CUL3Q13618 768 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 RASIP1Q5U651 963 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 ADGRG6Q86SQ4 1221 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 XYLT1Q86Y38 959 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 DDX50Q9BQ39 737 aaKnown RBP12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 RPAP3Q9H6T3 665 aaPredicted RBP12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 POPDC2Q9HBU9 364 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 ASNSD1Q9NWL6 643 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 PGAP2Q9UHJ9 254 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 SOX13Q9UN79 622 aa12.27□□□□□ -0.44
VIPAS39-211ENST00000557658 CYB561D2O14569 222 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 ADCY3O60266 1144 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 BPGMP07738 259 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 ASPAP45381 313 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 RPS6KA3P51812 740 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 CDH6P55285 790 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 STX3Q13277 289 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 BMPR2Q13873 1038 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 HIC1Q14526 733 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 CES4AQ5XG92 561 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 ATG4CQ96DT6 458 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 TUBGCP5Q96RT8 1024 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 CPXM1Q96SM3 734 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 GORASP1Q9BQQ3 440 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 SIKE1Q9BRV8 207 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 CENPKQ9BS16 269 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 ZNF395Q9H8N7 513 aaPredicted RBP12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 DMAP1Q9NPF5 467 aaPredicted RBP12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 PPM1HQ9ULR3 514 aa12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 MAFBQ9Y5Q3 323 aaPredicted RBP12.27□□□□□ -0.45
VIPAS39-211ENST00000557658 SPATA31C2B4DYI2 1134 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 APOEP02649 317 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 GSTT1P30711 240 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 ERFP50548 548 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 TFAMQ00059 246 aaKnown RBP12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 MMRN1Q13201 1228 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms