RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 SARGQ9BW04 601 aa5.95□□□□□ -1.46
GPHN-215ENST00000557654 QTRT1Q9BXR0 403 aaKnown RBP5.95□□□□□ -1.46
GPHN-215ENST00000557654 KRTAP17-1Q9BYP8 105 aa5.95□□□□□ -1.46
GPHN-215ENST00000557654 FLRT1Q9NZU1 646 aa5.95□□□□□ -1.46
GPHN-215ENST00000557654 VPS51Q9UID3 782 aa5.95□□□□□ -1.46
GPHN-215ENST00000557654 COL3A1P02461 1466 aaPredicted RBP5.95□□□□□ -1.46
GPHN-215ENST00000557654 H7C1Q1 480 aa5.94□□□□□ -1.46
GPHN-215ENST00000557654 PMM2O15305 246 aa5.94□□□□□ -1.46
GPHN-215ENST00000557654 MYCLP12524 364 aaPredicted RBP5.94□□□□□ -1.46
GPHN-215ENST00000557654 EPHB2P29323 1055 aa5.94□□□□□ -1.46
GPHN-215ENST00000557654 COPB1P53618 953 aaKnown RBP5.94□□□□□ -1.46
GPHN-215ENST00000557654 DEUP1Q05D60 604 aa5.94□□□□□ -1.46
GPHN-215ENST00000557654 SRSF7Q16629 238 aaKnown RBP eCLIP5.94□□□□□ -1.46
GPHN-215ENST00000557654 SUPT20HL1Q3ZLR7 823 aa5.94□□□□□ -1.46
GPHN-215ENST00000557654 MTHFD1LQ6UB35 978 aa5.94□□□□□ -1.46
GPHN-215ENST00000557654 CCAR1Q8IX12 1150 aaKnown RBP5.94□□□□□ -1.46
GPHN-215ENST00000557654 CCDC33Q8N5R6 958 aa5.94□□□□□ -1.46
GPHN-215ENST00000557654 IPCEF1Q8WWN9 437 aaPredicted RBP5.94□□□□□ -1.46
GPHN-215ENST00000557654 LRRC46Q96FV0 321 aa5.94□□□□□ -1.46
GPHN-215ENST00000557654 ASB2Q96Q27 587 aa5.94□□□□□ -1.46
GPHN-215ENST00000557654 PDGFCQ9NRA1 345 aa5.94□□□□□ -1.46
GPHN-215ENST00000557654 DNAJB11Q9UBS4 358 aa5.94□□□□□ -1.46
GPHN-215ENST00000557654 WDR91A4D1P6 747 aa5.93□□□□□ -1.46
GPHN-215ENST00000557654 INMTO95050 263 aa5.93□□□□□ -1.46
GPHN-215ENST00000557654 PRR35P0CG20 571 aa5.93□□□□□ -1.46
GPHN-215ENST00000557654 TSHRP16473 764 aa5.93□□□□□ -1.46
GPHN-215ENST00000557654 CASP5P51878 434 aa5.93□□□□□ -1.46
GPHN-215ENST00000557654 YTHDF3Q7Z739 585 aaKnown RBP5.93□□□□□ -1.46
GPHN-215ENST00000557654 RAB11FIP4Q86YS3 637 aa5.93□□□□□ -1.46
GPHN-215ENST00000557654 SFTPA1Q8IWL2 248 aa5.93□□□□□ -1.46
GPHN-215ENST00000557654 RNF152Q8N8N0 203 aa5.93□□□□□ -1.46
GPHN-215ENST00000557654 IQCDQ96DY2 449 aa5.93□□□□□ -1.46
GPHN-215ENST00000557654 FAM83DQ9H4H8 585 aa5.93□□□□□ -1.46
GPHN-215ENST00000557654 MGAT4CQ9UBM8 478 aa5.93□□□□□ -1.46
GPHN-215ENST00000557654 RGS17Q9UGC6 210 aaPredicted RBP5.93□□□□□ -1.46
GPHN-215ENST00000557654 CAPN11Q9UMQ6 739 aa5.93□□□□□ -1.46
GPHN-215ENST00000557654 SLC27A6Q9Y2P4 619 aa5.93□□□□□ -1.46
GPHN-215ENST00000557654 POC1B-GALNT4F8VUJ3 575 aa5.92□□□□□ -1.46
GPHN-215ENST00000557654 ADAMTS3O15072 1205 aa5.92□□□□□ -1.46
GPHN-215ENST00000557654 CYP2A6P11509 494 aaPredicted RBP5.92□□□□□ -1.46
GPHN-215ENST00000557654 APEHP13798 732 aaKnown RBP5.92□□□□□ -1.46
GPHN-215ENST00000557654 FHL3Q13643 280 aa5.92□□□□□ -1.46
GPHN-215ENST00000557654 SAFBQ15424 915 aaKnown RBP eCLIP5.92□□□□□ -1.46
GPHN-215ENST00000557654 FAM187BQ17R55 369 aa5.92□□□□□ -1.46
GPHN-215ENST00000557654 KSR2Q6VAB6 950 aa5.92□□□□□ -1.46
GPHN-215ENST00000557654 CATSPERGQ6ZRH7 1159 aa5.92□□□□□ -1.46
GPHN-215ENST00000557654 SDR16C5Q8N3Y7 309 aa5.92□□□□□ -1.46
GPHN-215ENST00000557654 GALNT4Q8N4A0 578 aa5.92□□□□□ -1.46
GPHN-215ENST00000557654 ATP11CQ8NB49 1132 aa5.92□□□□□ -1.46
GPHN-215ENST00000557654 SELENOOQ9BVL4 669 aa5.92□□□□□ -1.46
GPHN-215ENST00000557654 NAA15Q9BXJ9 866 aaKnown RBP5.92□□□□□ -1.46
GPHN-215ENST00000557654 SLC29A3Q9BZD2 475 aa5.92□□□□□ -1.46
GPHN-215ENST00000557654 HEYLQ9NQ87 328 aaPredicted RBP5.92□□□□□ -1.46
GPHN-215ENST00000557654 TFCP2L1Q9NZI6 479 aa5.92□□□□□ -1.46
GPHN-215ENST00000557654 DCAF1Q9Y4B6 1507 aa5.92□□□□□ -1.46
GPHN-215ENST00000557654 PPP6CO00743 305 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 KIF3BO15066 747 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 THAP12O43422 761 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 CA12O43570 354 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 GCATO75600 419 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 TRIM27P14373 513 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 FGFR2P21802 821 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 ATICP31939 592 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 HTR7P34969 479 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 GNALP38405 381 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 ARHGAP25P42331 645 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 STT3AP46977 705 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 EZH2Q15910 746 aaKnown RBP5.91□□□□□ -1.46
GPHN-215ENST00000557654 MTX3Q5HYI7 312 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 ZNF626Q68DY1 528 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 SLC2A7Q6PXP3 512 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 CRTC1Q6UUV9 634 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 C8orf58Q8NAV2 365 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 MAFAQ8NHW3 353 aaPredicted RBP5.91□□□□□ -1.46
GPHN-215ENST00000557654 ZNF668Q96K58 619 aaPredicted RBP5.91□□□□□ -1.46
GPHN-215ENST00000557654 ZNF778Q96MU6 729 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 SLC25A32Q9H2D1 315 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 KLHL13Q9P2N7 655 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 RNF7Q9UBF6 113 aa5.91□□□□□ -1.46
GPHN-215ENST00000557654 NKX1-2Q9UD57 310 aaPredicted RBP5.91□□□□□ -1.46
GPHN-215ENST00000557654 M0R3H8 397 aa5.9□□□□□ -1.46
GPHN-215ENST00000557654 FOXN3O00409 490 aaPredicted RBP5.9□□□□□ -1.46
GPHN-215ENST00000557654 SNX2O60749 519 aa5.9□□□□□ -1.46
GPHN-215ENST00000557654 MT-CO3P00414 261 aa5.9□□□□□ -1.46
GPHN-215ENST00000557654 SFPQP23246 707 aaKnown RBP eCLIP5.9□□□□□ -1.464e-7■□□□□ 9.9
GPHN-215ENST00000557654 LMO1P25800 156 aa5.9□□□□□ -1.46
GPHN-215ENST00000557654 RBL1P28749 1068 aa5.9□□□□□ -1.46
GPHN-215ENST00000557654 COPAP53621 1224 aa5.9□□□□□ -1.46
GPHN-215ENST00000557654 SLC18B1Q6NT16 456 aa5.9□□□□□ -1.46
GPHN-215ENST00000557654 NEK8Q86SG6 692 aa5.9□□□□□ -1.46
GPHN-215ENST00000557654 FSTL5Q8N475 847 aaPredicted RBP5.9□□□□□ -1.46
GPHN-215ENST00000557654 PJA1Q8NG27 643 aa5.9□□□□□ -1.46
GPHN-215ENST00000557654 PARD3BQ8TEW8 1205 aa5.9□□□□□ -1.46
GPHN-215ENST00000557654 PRR11Q96HE9 360 aaPredicted RBP5.9□□□□□ -1.46
GPHN-215ENST00000557654 EFHD1Q9BUP0 239 aa5.9□□□□□ -1.46
GPHN-215ENST00000557654 SNX15Q9NRS6 342 aa5.9□□□□□ -1.46
GPHN-215ENST00000557654 STEAP1Q9UHE8 339 aa5.9□□□□□ -1.46
GPHN-215ENST00000557654 SMIM35A0A1B0GVV1 85 aa5.89□□□□□ -1.47
GPHN-215ENST00000557654 UBE2Q2LH0YL09 131 aa5.89□□□□□ -1.47
GPHN-215ENST00000557654 NCK2O43639 380 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms