RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 SAMSN1Q9NSI8 373 aaKnown RBP8.79□□□□□ -1
PSEN1-223ENST00000557511 TMEM63CQ9P1W3 806 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 APEX2Q9UBZ4 518 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 TTC28Q96AY4 2481 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 SPTBN5Q9NRC6 3674 aaKnown RBP8.79□□□□□ -1
PSEN1-223ENST00000557511 C2orf16Q68DN1 1984 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 ZNF840PA6NDX5 716 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 NRG2O14511 850 aaPredicted RBP8.78□□□□□ -1
PSEN1-223ENST00000557511 SETSIPP0DME0 302 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 MBL2P11226 248 aaPredicted RBP8.78□□□□□ -1
PSEN1-223ENST00000557511 SNX16P57768 344 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 BPIFB4P59827 614 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 PTK2Q05397 1052 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 BST2Q10589 180 aaKnown RBP8.78□□□□□ -1
PSEN1-223ENST00000557511 PDGFRLQ15198 375 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 MLF2Q15773 248 aaPredicted RBP8.78□□□□□ -1
PSEN1-223ENST00000557511 FILIP1LQ4L180 1135 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 SLC44A4Q53GD3 710 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 TRIM65Q6PJ69 517 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 VITQ6UXI7 678 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 ZNF852Q6ZMS4 543 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 Q6ZNB5 142 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 CLEC20AQ6ZU45 233 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 HFE2Q6ZVN8 426 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 PAQR9Q6ZVX9 377 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 ARHGEF19Q8IW93 802 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 SIX6OS1Q8N1H7 587 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 ARL14EPQ8N8R7 260 aaPredicted RBP8.78□□□□□ -1
PSEN1-223ENST00000557511 WHAMMQ8TF30 809 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 ASIC4Q96FT7 647 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 NELL2Q99435 816 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 SMOQ99835 787 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 RPP25Q9BUL9 199 aaKnown RBP8.78□□□□□ -1
PSEN1-223ENST00000557511 VPS16Q9H269 839 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 C8orf33Q9H7E9 229 aaPredicted RBP8.78□□□□□ -1
PSEN1-223ENST00000557511 TAB2Q9NYJ8 693 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 CHORDC1Q9UHD1 332 aaPredicted RBP8.78□□□□□ -1
PSEN1-223ENST00000557511 TSPAN16Q9UKR8 245 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 CEP83Q9Y592 693 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 DENND4AQ7Z401 1863 aa8.78□□□□□ -1
PSEN1-223ENST00000557511 C2orf78A6NCI8 922 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 GOLGA6L19H0YKK7 550 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 M0QYV0 167 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 SLC9A3R1O14745 358 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-223ENST00000557511 XPO1O14980 1071 aaKnown RBP8.77□□□□□ -1.01
PSEN1-223ENST00000557511 THAP12O43422 761 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 CAVIN2O95810 425 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 GLULP15104 373 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 SLC9A1P19634 815 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 FCARP24071 287 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 PON1P27169 355 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 GNA15P30679 374 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 ATP5C1P36542 298 aaKnown RBP8.77□□□□□ -1.01
PSEN1-223ENST00000557511 CLCN5P51795 746 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 CACNA2D1P54289 1103 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 RAPGEF1Q13905 1077 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 MTF1Q14872 753 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 UBXN2BQ14CS0 331 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 CNGA2Q16280 664 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 ANO6Q4KMQ2 910 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 PHLDB3Q6NSJ2 640 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 LCLAT1Q6UWP7 414 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 TPRG1Q6ZUI0 275 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 C11orf57Q6ZUT1 292 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-223ENST00000557511 RSRC2Q7L4I2 434 aaKnown RBP8.77□□□□□ -1.01
PSEN1-223ENST00000557511 TMEM150AQ86TG1 271 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 IRF2BP1Q8IU81 584 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 CPA6Q8N4T0 437 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 AOPEPQ8N6M6 819 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 SCAMP5Q8TAC9 235 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 LMO3Q8TAP4 145 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 SH3RF2Q8TEC5 729 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 USP13Q92995 863 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-223ENST00000557511 NOX5Q96PH1 765 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 LSM14BQ9BX40 385 aaKnown RBP8.77□□□□□ -1.01
PSEN1-223ENST00000557511 PLA2G2FQ9BZM2 168 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 SMG9Q9H0W8 520 aaKnown RBP8.77□□□□□ -1.01
PSEN1-223ENST00000557511 IRF2BPLQ9H1B7 796 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 SMOC2Q9H3U7 446 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 TBC1D17Q9HA65 648 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 TRPV5Q9NQA5 729 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 FANCLQ9NW38 375 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 DUS2Q9NX74 493 aaKnown RBP8.77□□□□□ -1.01
PSEN1-223ENST00000557511 GMIPQ9P107 970 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 NAGPAQ9UK23 515 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 LSM7Q9UK45 103 aaKnown RBP8.77□□□□□ -1.01
PSEN1-223ENST00000557511 DNAJC12Q9UKB3 198 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 STRIP2Q9ULQ0 834 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 ARHGAP26Q9UNA1 814 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 SCML2Q9UQR0 700 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 SH3BP1Q9Y3L3 701 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 DAAM1Q9Y4D1 1078 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 NCANO14594 1321 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 CUL9Q8IWT3 2517 aa8.77□□□□□ -1.01
PSEN1-223ENST00000557511 KANSL1LA0AUZ9 987 aa8.76□□□□□ -1.01
PSEN1-223ENST00000557511 O00370 1275 aa8.76□□□□□ -1.01
PSEN1-223ENST00000557511 TNFRSF10BO14763 440 aa8.76□□□□□ -1.01
PSEN1-223ENST00000557511 TLR5O60602 858 aa8.76□□□□□ -1.01
PSEN1-223ENST00000557511 TADA3O75528 432 aa8.76□□□□□ -1.01
PSEN1-223ENST00000557511 BEST1O76090 585 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms