RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 MEA1Q16626 185 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 SNX30Q5VWJ9 437 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 PMF1Q6P1K2 205 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 DENND1BQ6P3S1 775 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 CACNA2D4Q7Z3S7 1137 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 PASD1Q8IV76 773 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 RNF214Q8ND24 703 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 SLC35F5Q8WV83 523 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 KCTD13Q8WZ19 329 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 NAP1L5Q96NT1 182 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 RNF38Q9H0F5 515 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 NMUR1Q9HB89 426 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 ST7Q9NRC1 585 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 SMPD4Q9NXE4 827 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 CA14Q9ULX7 337 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 ARHGAP26Q9UNA1 814 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 CPQQ9Y646 472 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 USP3Q9Y6I4 520 aa11.13□□□□□ -0.63
HNRNPC-232ENST00000557442 TMEM221A6NGB7 291 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 M0R296 226 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 ZNF263O14978 683 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 COCHO43405 550 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 CYP11B1P15538 503 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 KRT9P35527 623 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 SOX5P35711 763 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 GPD2P43304 727 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 PSEN1P49768 467 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 ZNF445P59923 1031 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 YWHAGP61981 247 aaKnown RBP eCLIP11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 SLC7A9P82251 487 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 USP4Q13107 963 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 MTF1Q14872 753 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 ZNF77Q15935 545 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 ARHGAP29Q52LW3 1261 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 CC2D1AQ6P1N0 951 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 SIX5Q8N196 739 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 ARHGAP18Q8N392 663 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 SH3RF2Q8TEC5 729 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 DNASE1L2Q92874 299 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 IRF7Q92985 503 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 ASIC4Q96FT7 647 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 ZFYVE19Q96K21 471 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 LRRC3BQ96PB8 259 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 C1QTNF1Q9BXJ1 281 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 PDCL3Q9H2J4 239 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 CYLDQ9NQC7 956 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 CNGB3Q9NQW8 809 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 ARHGEF3Q9NR81 526 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 THG1LQ9NWX6 298 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 OSER1Q9NX31 292 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 PCDHGC3Q9UN70 934 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 CEP83Q9Y592 693 aa11.12□□□□□ -0.63
HNRNPC-232ENST00000557442 A0A1W2PQC6 194 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 LEFTY2O00292 366 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 CHADO15335 359 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 RALAP11233 206 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 RARGP13631 454 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 STAT1P42224 750 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 UBASH3AP57075 661 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 DAOAP59103 153 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 PLCB2Q00722 1185 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 PDCLQ13371 301 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 TMEM31Q5JXX7 168 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 C10orf120Q5SQS8 335 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 TAF3Q5VWG9 929 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 PM20D1Q6GTS8 502 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 RSRC2Q7L4I2 434 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 SCD5Q86SK9 330 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 TADA2BQ86TJ2 420 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 NOP9Q86U38 636 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 DDX42Q86XP3 938 aaKnown RBP eCLIP11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 C1orf131Q8NDD1 294 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 RIN3Q8TB24 985 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 CSGALNACT1Q8TDX6 532 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 EPS8L1Q8TE68 723 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 NDRG1Q92597 394 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 HSFY1Q96LI6 401 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 NOX5Q96PH1 765 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 MIS12Q9H081 205 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 MFSD1Q9H3U5 465 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 C11orf16Q9NQ32 467 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 CLIC5Q9NZA1 410 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 IFNKQ9P0W0 207 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 WNT16Q9UBV4 365 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 CYTH4Q9UIA0 394 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 NUDT5Q9UKK9 219 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 WDFY4Q6ZS81 3184 aa11.11□□□□□ -0.63
HNRNPC-232ENST00000557442 YJEFN3A6XGL0 299 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 E5RJQ4 531 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 E7ENQ6 273 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 ARNTLO00327 626 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 SCAMP3O14828 347 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 MDM4O15151 490 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 FBXO21O94952 628 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 TBX18O95935 607 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 PDGFBP01127 241 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 IRF1P10914 325 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 TCF3P15923 654 aa11.1□□□□□ -0.63
HNRNPC-232ENST00000557442 ATP5C1P36542 298 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms