RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 PDE4CQ08493 712 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 GRSF1Q12849 480 aaKnown RBP eCLIP8.26□□□□□ -1.09
PSEN1-222ENST00000557356 USP4Q13107 963 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 E2F5Q15329 346 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 ZNF77Q15935 545 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 FILIP1LQ4L180 1135 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 RAB41Q5JT25 222 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 C10orf120Q5SQS8 335 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 BTBD8Q5XKL5 378 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 CAVIN1Q6NZI2 390 aaKnown RBP8.26□□□□□ -1.09
PSEN1-222ENST00000557356 HTR3DQ70Z44 454 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 RSRC2Q7L4I2 434 aaKnown RBP8.26□□□□□ -1.09
PSEN1-222ENST00000557356 GPIHBP1Q8IV16 184 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 ARHGEF19Q8IW93 802 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 CCDC105Q8IYK2 499 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 ADGRG2Q8IZP9 1017 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 TMEM105Q8N8V8 129 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 ST13P5Q8NFI4 369 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-222ENST00000557356 RNF139Q8WU17 664 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 SLC35F5Q8WV83 523 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 IRGQQ8WZA9 623 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 LRRC3BQ96PB8 259 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 NOX5Q96PH1 765 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 BPIFA3Q9BQP9 254 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 DCLK3Q9C098 648 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 SMG9Q9H0W8 520 aaKnown RBP8.26□□□□□ -1.09
PSEN1-222ENST00000557356 SEMA4AQ9H3S1 761 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 ECT2Q9H8V3 914 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 PLCB1Q9NQ66 1216 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 ABCC13Q9NSE7 274 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 SAMSN1Q9NSI8 373 aaKnown RBP8.26□□□□□ -1.09
PSEN1-222ENST00000557356 FANCLQ9NW38 375 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 GMIPQ9P107 970 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 NAGPAQ9UK23 515 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 DNAJC12Q9UKB3 198 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.26□□□□□ -1.09
PSEN1-222ENST00000557356 CCL26Q9Y258 94 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 CPQQ9Y646 472 aa8.26□□□□□ -1.09
PSEN1-222ENST00000557356 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-222ENST00000557356 M0QYV0 167 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 RNF225M0QZC1 329 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-222ENST00000557356 NRG2O14511 850 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-222ENST00000557356 TRDMT1O14717 391 aaKnown RBP8.25□□□□□ -1.09
PSEN1-222ENST00000557356 THAP12O43422 761 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 LAMTOR5O43504 91 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 PI15O43692 258 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 CCDC172P0C7W6 258 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 RARGP13631 454 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 DRD1P21728 446 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 CTHP32929 405 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 CHKAP35790 457 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 EIF2DP41214 584 aaKnown RBP8.25□□□□□ -1.09
PSEN1-222ENST00000557356 ZNF132P52740 706 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 NRLP54845 237 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 ARHGAP44Q17R89 818 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 PKDCCQ504Y2 493 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 MIIPQ5JXC2 388 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 CDKAL1Q5VV42 579 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 CWF19L1Q69YN2 538 aaKnown RBP8.25□□□□□ -1.09
PSEN1-222ENST00000557356 C1orf210Q8IVY1 113 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 TTC16Q8NEE8 873 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 UBA3Q8TBC4 463 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 ZNF606Q8WXB4 792 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 SHC3Q92529 594 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 RSPRY1Q96DX4 576 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 FAM122AQ96E09 287 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 KREMEN1Q96MU8 473 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 SLC22A12Q96S37 553 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 P2RY13Q9BPV8 354 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 FAM126AQ9BYI3 521 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-222ENST00000557356 STK33Q9BYT3 514 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 MIS12Q9H081 205 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 EBF3Q9H4W6 596 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 LMAN1LQ9HAT1 526 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.25□□□□□ -1.09
PSEN1-222ENST00000557356 GTSE1Q9NYZ3 720 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 TMEM63CQ9P1W3 806 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 CFAP97Q9P2B7 532 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 LIMA1Q9UHB6 759 aaKnown RBP8.25□□□□□ -1.09
PSEN1-222ENST00000557356 FBXO4Q9UKT5 387 aa8.25□□□□□ -1.09
PSEN1-222ENST00000557356 TECTAO75443 2155 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 DOCK6Q96HP0 2047 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 CUL9Q8IWT3 2517 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 A0A1W2PQH9 124 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 CYP26A1O43174 497 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 DCNP07585 359 aaKnown RBP8.24□□□□□ -1.09
PSEN1-222ENST00000557356 CD72P21854 359 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 BRD2P25440 801 aaKnown RBP8.24□□□□□ -1.09
PSEN1-222ENST00000557356 GNA15P30679 374 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 ZNF165P49910 485 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 VCPP55072 806 aaKnown RBP8.24□□□□□ -1.09
PSEN1-222ENST00000557356 ZNF445P59923 1031 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 YWHAGP61981 247 aaKnown RBP eCLIP8.24□□□□□ -1.09
PSEN1-222ENST00000557356 GAD2Q05329 585 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 MTA1Q13330 715 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 KRT31Q15323 416 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 EML3Q32P44 896 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 ZNF528Q3MIS6 628 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 KLHDC7AQ5VTJ3 777 aa8.24□□□□□ -1.09
PSEN1-222ENST00000557356 BSPRYQ5W0U4 402 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms