RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 MLXIPLQ9NP71 852 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 ZAP70P43403 619 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 CCNG1P51959 295 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 TTLL4Q14679 1199 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 EFHC1Q5JVL4 640 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 PROX1Q92786 737 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 RNF112Q9ULX5 631 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 DUSP12Q9UNI6 340 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 MAGEB16A2A368 324 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 FAM20BO75063 409 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 SERPINA1P01009 418 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 RGS1Q08116 209 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 SNRNP48Q6IEG0 339 aaKnown RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 VPS35Q96QK1 796 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 UPB1Q9UBR1 384 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 L1RE1Q9UN81 338 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 R3HDM2Q9Y2K5 976 aaKnown RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 CROCC2H7BZ55 1655 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 CD4P01730 458 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ERVK-10P10266 1014 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 PRELPP51888 382 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ENPEPQ07075 957 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 IL18R1Q13478 541 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 MTMR1Q13613 665 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 RFX4Q33E94 735 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 CARD8Q9Y2G2 431 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 MROH7Q68CQ1 1323 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 A0A0G2JPF8 293 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 HNRNPCL3B7ZW38 293 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ECM2O94769 699 aaPredicted RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 HNRNPCL4P0DMR1 293 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ZBTB6Q15916 424 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 MTERF2Q49AM1 385 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 RAB6BQ9NRW1 208 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 RAPGEFL1Q9UHV5 662 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 PRODHO43272 600 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 GATBO75879 557 aaKnown RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 GPIHBP1Q8IV16 184 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 SSH3Q8TE77 659 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 JARID2Q92833 1246 aaPredicted RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 OR6B1O95007 311 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 LDLRP01130 860 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 PSMB9P28065 219 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 SYN2Q92777 582 aaPredicted RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 PAIP1Q9H074 479 aaKnown RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 DDX47Q9H0S4 455 aaKnown RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ENTPD7Q9NQZ7 604 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 CHORDC1Q9UHD1 332 aaPredicted RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 POLIQ9UNA4 740 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 PLEKHG2Q9H7P9 1386 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 CCDC154A6NI56 674 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 CES2O00748 559 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ARF5P84085 180 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 NME3Q13232 169 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 BHMT2Q9H2M3 363 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 GPC6Q9Y625 555 aaPredicted RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ABCC4O15439 1325 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 GNG14A0A1W2PPG7 69 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 AP3D1O14617 1153 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 HUNKP57058 714 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 EIF4A1P60842 406 aaKnown RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 C1orf189Q5VU69 101 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ERICH5Q6P6B1 374 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 C10orf107Q8IVU9 208 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 YIPF2Q9BWQ6 316 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 HEMGNQ9BXL5 484 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 MTMR12Q9C0I1 747 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 EVA1BQ9NVM1 165 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ST3GAL5Q9UNP4 418 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 TBC1D30Q9Y2I9 924 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ZMYM2Q9UBW7 1377 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 PLK4O00444 970 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 BTKQ06187 659 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 TRIM32Q13049 653 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 DNAJC3Q13217 504 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 PKN1Q16512 942 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 FAM47AQ5JRC9 791 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 TCAIMQ8N3R3 496 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 SRFBP1Q8NEF9 429 aaKnown RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 GSDMCQ9BYG8 508 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 GPR63Q9BZJ6 419 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 SAMSN1Q9NSI8 373 aaKnown RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 GGA3Q9NZ52 723 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 PDGFRBP09619 1106 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ITGB6P18564 788 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 TSHZ1Q6ZSZ6 1077 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 MAP4K1Q92918 833 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 VMP1Q96GC9 406 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 OSBPL11Q9BXB4 747 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ZCCHC2Q9C0B9 1178 aaKnown RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ZCWPW1Q9H0M4 648 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 PADI4Q9UM07 663 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 TRIM17Q9Y577 477 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 NEURL1BA8MQ27 555 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 FGRP09769 529 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 SLC39A6Q13433 755 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 XPR1Q9UBH6 696 aa9.09□□□□□ -0.95
SYNE3-205ENST00000557275 SCAF8Q9UPN6 1271 aaKnown RBP9.09□□□□□ -0.95
SYNE3-205ENST00000557275 LOC100653049A0A140TA62 436 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms